PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco013629.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 279aa    MW: 28784.2 Da    PI: 7.5123
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco013629.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-192070256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+t+e+Aa+a++ a+++l+g+
  Aco013629.1 20 KFIGVRQRP-SGRWVAEIKDSS---QKVRLWLGTFDTPEDAARAYDDAARSLRGA 70
                 899******.7*********42...36*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.45E-181976No hitNo description
Gene3DG3DSA:3.30.730.101.4E-282077IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-202077IPR016177DNA-binding domain
SMARTSM003801.3E-342083IPR001471AP2/ERF domain
PROSITE profilePS5103219.9542077IPR001471AP2/ERF domain
PfamPF008473.5E-132069IPR001471AP2/ERF domain
PRINTSPR003672.2E-72132IPR001471AP2/ERF domain
PRINTSPR003672.2E-74359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAGPTEGEKA AATRAPPPKK FIGVRQRPSG RWVAEIKDSS QKVRLWLGTF DTPEDAARAY  60
DDAARSLRGA NARTNFGSSS SSSSSSSSTS GGGRVAEEDL PPFSFEDGAD ADADAEAEAE  120
DLIDLLKAKL LEGRTASRQL PSQQGEISGR GAHQRPPGLP CWWPSAASAS APASASASCN  180
STDGQNTKST GVRPLSGLEK RLLSSSGVAK HSSSSSSTRD YSTGDYSWIT GNRSALSSSA  240
LQPTLHGRSS SDGSAISFQE AAAGSFASSD GAKRPRLD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-18related to AP2 11