PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco009751.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 161aa    MW: 17668.4 Da    PI: 10.7058
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco009751.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.44.8e-1678139162
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                  +ke kr +r+ +NR++A+  R+RKka++  Le kvk Le++N++L ++l++l++e + l++ 
  Aco009751.1  78 DKEHKRLKRLLRNRVSAQQARERKKAYLNDLEAKVKDLEKKNSELEERLSTLQNENQMLRQI 139
                  5899*****************************************************99876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR000419.9E-6621IPR001630cAMP response element binding (CREB) protein
PRINTSPR000419.9E-67793IPR001630cAMP response element binding (CREB) protein
SMARTSM003381.8E-1678142IPR004827Basic-leucine zipper domain
PfamPF001704.4E-1479140IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.79480143IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.7E-1782142No hitNo description
SuperFamilySSF579597.5E-1482140No hitNo description
CDDcd147042.04E-1583134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
PRINTSPR000419.9E-695115IPR001630cAMP response element binding (CREB) protein
PRINTSPR000419.9E-6115132IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0010099Biological Processregulation of photomorphogenesis
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0010224Biological Processresponse to UV-B
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MQEQATSSLP SSSERSSSSA PPMEVKEGVE SDEEIRRVPE FGAGASTSGR EAGSAAGPDR  60
TQSSAQTGQR RRGRSPADKE HKRLKRLLRN RVSAQQARER KKAYLNDLEA KVKDLEKKNS  120
ELEERLSTLQ NENQMLRQIL KNTTLSRRGS SSSANGEGQQ *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2oqq_A8e-16103142342Transcription factor HY5
2oqq_B8e-16103142342Transcription factor HY5
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00117ampDAPTransfer from AT5G11260Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010914895.12e-89PREDICTED: transcription factor HY5
SwissprotO246461e-66HY5_ARATH; Transcription factor HY5
TrEMBLM0RLS98e-79M0RLS9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P27050_0012e-78(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.12e-66bZIP family protein