PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco007216.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 475aa    MW: 51487.7 Da    PI: 8.2177
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco007216.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-09189229545
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Aco007216.1 189 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 229
                  7889************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-7179232No hitNo description
SMARTSM003385.0E-8185248IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415187231IPR004827Basic-leucine zipper domain
CDDcd147082.34E-22189241No hitNo description
SuperFamilySSF579597.5E-7189232No hitNo description
PfamPF001701.0E-6189229IPR004827Basic-leucine zipper domain
PROSITE patternPS000360192207IPR004827Basic-leucine zipper domain
PfamPF141448.7E-33271345IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MGSRRGGIGA EDVTGAAAAA AAAAGAMPSF VSPFLGDHST TEGNNMRSSR IPDFGAPDQS  60
TRFRIEDVAA LRTSTLFNPK SVAQPITSDS LQYGGYNKLP ASTDINSSST GAPLPTLPQH  120
KGQPSNLVVL ASGNVENWGE STMPDTSPRT DTSTDGDTDD KNQRFEQGQG ATIAASDSSV  180
KSKDKLDQKT LRRLAQNREA ARKSRLRKKA YVQQLESSRL KLTQLEQELQ RARQQGIFIS  240
SSGDQSHSMN ANGALAFDME YARWLEEQNR QISELRAAVN AHAGDTELRT IVDGVMAHYD  300
EIFRLKGIAA KADVFHMLSG MWKTPAERCF LWLGGFRSSE LLKLLTGQLE PLSEQQVAGI  360
CNLQQSSQQA EDALSQGMEA LQQSLAETLT SGSPGPAGPS GNVANYMGQM AMAMGKLGTL  420
ENFLRQADNL RQQTLQQMLR ILTTRQSARA LLAISDYFSR LRALSSLWLA RPRE*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010904690.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC5XMK10.0C5XMK1_SORBI; Putative uncharacterized protein Sb03g037560
STRINGSb03g037560.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-143TGACG motif-binding factor 6