PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco006270.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 333aa    MW: 37180.8 Da    PI: 9.0965
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco006270.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.2e-104888545
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                 k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Aco006270.1 48 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 88
                 788*************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-83891No hitNo description
SMARTSM003384.8E-1044107IPR004827Basic-leucine zipper domain
PfamPF077163.9E-74690IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4154690IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.44E-74891No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
PfamPF141445.2E-31130205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MADAGERTDT STDIDADERN HRLERGQTAV VAASDSSDRS KDKTGDQKTL RRLAQNREAA  60
RKSRLRKKAY VQQLESSRLK LTQLEQELQR ARQQGIFISS TGDQSHTISA NGAKSFDIEY  120
GRWLEEHNRQ VNELRAAVNA HASDTDLRTI VDGITTQFDE IFKIKGVAAK ADVFHILSGM  180
WKTPAERCFM WLGGFRPSEI LKLLSNQLEP LTEQQVMGLC DLQQSSQQAE DALSQGMEAL  240
QQSLAETLAG SLGPSGSSGN VANYMGQMAM AMGKLGTLEK FLRQADNLRQ QTLQQMHQRL  300
TTRQSARAVL TIHDYFSRLR ALSSLWLARP RE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM6664391e-118KM666439.1 Ananas bracteatus clone 51748 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009393097.10.0PREDICTED: transcription factor HBP-1b(c1)-like
RefseqXP_009393096.10.0PREDICTED: transcription factor HBP-1b(c1)-like
RefseqXP_009393095.10.0PREDICTED: transcription factor HBP-1b(c1)-like
RefseqXP_009419684.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X3
RefseqXP_009419682.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLM0SHL80.0M0SHL8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P00340_0010.0(Musa acuminata)
STRINGGSMUA_Achr3P25020_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-148TGACG motif-binding factor 6