PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco005593.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family BES1
Protein Properties Length: 328aa    MW: 34950.8 Da    PI: 8.2589
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco005593.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822206.57.3e-6421501150
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags...sasaspesslq 95 
                  +++gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+Gnyklpk++DnneVlkALc+eAGwvve+DGttyrkg++p e+ +++gs   sas sp+ss+q
  Aco005593.1   2 TSGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAYGNYKLPKHCDNNEVLKALCHEAGWVVEEDGTTYRKGCRPAERVDVVGSvaaSASPSPCSSYQ 99 
                  589*************************************************************************8888887611144466666666 PP

       DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150
                          +sp+ sy++sp sss+psp+s++ i++ ++    + llp+l++ls++sss+
  Aco005593.1 100 --------PSPCMSYNPSPPSSSIPSPTSSSYITNPNSgtdcNPLLPWLKTLSSASSSA 150
                  ........************************999888999999********9977764 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.9E-643144IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MTSGGRMPTW RERENNKRRE RRRRAIAAKI FAGLRAYGNY KLPKHCDNNE VLKALCHEAG  60
WVVEEDGTTY RKGCRPAERV DVVGSVAASA SPSPCSSYQP SPCMSYNPSP PSSSIPSPTS  120
SSYITNPNSG TDCNPLLPWL KTLSSASSSA SSSKLHLNIH CGSISAPVTP PLSSPTARTP  180
RIRTDWDDRT ARLPQWANGT GTPYTLLLSS TPPSPGRQVS PDAAWLTSSP SSPTFTLVSA  240
NPFGIYKEAS ASAAGSSRMW TPGQSGTCSP VPGDARDIHM SDCASDEFAF GSGSINGNVV  300
KPWEGETIHE ECGSDELELT LGSSRTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020098786.10.0protein BZR1 homolog 2-like
SwissprotQ5Z9E51e-109BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A199VP940.0A0A199VP94_ANACO; Protein BZR 3
STRINGXP_008796066.11e-131(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-78BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]