PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco003778.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family BES1
Protein Properties Length: 229aa    MW: 23844.9 Da    PI: 10.6219
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco003778.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822143.22.3e-4431141107
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpk.raDnneVlkALcreAGwvvedDGttyr..kgskpl.eeaeaagssas.aspess 93 
                  gg+gr  tw+ErEnnkrRERrRRaiaaki+aGLRa+G y+lp+ ++Dnne lkALcr+AGw+v dDGtt+r  +g++p+   +++a +    + pe++
  Aco003778.1   3 GGGGRVATWRERENNKRRERRRRAIAAKIFAGLRAHGSYALPAnHSDNNELLKALCRQAGWTVLDDGTTFRttNGCEPPpPPEQIAATAPPpTRPENP 100
                  689***************************************669**************************9899***96444444444333777777 PP

       DUF822  94 lqsslkssalaspv 107
                    ss+++ a+  p 
  Aco003778.1 101 NPSSVVNPAFLLPF 114
                  77888887776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.2E-414116IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MRGGGGRVAT WRERENNKRR ERRRRAIAAK IFAGLRAHGS YALPANHSDN NELLKALCRQ  60
AGWTVLDDGT TFRTTNGCEP PPPPEQIAAT APPPTRPENP NPSSVVNPAF LLPFLRNLSS  120
LPPLRISSSA PATPPLSSPT AAAAARAPPA AAAPGATSPT PPPLWGGALS TAPASPTFNL  180
VHTAPAVGVG ELERGEGRVV KPWEGEKIHE VGVDELELTL GVGRNGGGG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-151082375444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-151082375444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-151082375444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-151082375444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907212.19e-51protein BZR1 homolog 1
SwissprotQ94A431e-38BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A199V3532e-81A0A199V353_ANACO; Protein BZR 1 (Fragment)
STRINGXP_008795632.14e-48(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54743453
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18890.12e-15BES1/BZR1 homolog 3