PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco003175.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 265aa    MW: 26746.6 Da    PI: 6.3631
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco003175.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1254.2e-082022421353
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  NR +A rs +RK  ++ eLe+kv++L++e ++L  +l  l+
  Aco003175.1 202 NRQSAARSKERKIRYTSELEKKVQTLQTEATTLSAQLTLLQ 242
                  **********************************9998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-5190254IPR004827Basic-leucine zipper domain
CDDcd147031.85E-21195243No hitNo description
SuperFamilySSF579592.53E-9198244No hitNo description
Gene3DG3DSA:1.20.5.1707.3E-10201244No hitNo description
PfamPF077166.6E-5202243IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.554202243IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MDLTGPRFAA PTQVPSAPPN PNPSPRPFGG GGGGGGGGGG GGGGGHRRAH SETFIRLPDD  60
FLFDSDPDFG ISDIDFPSLS DDSTSTGAAA AAAAGGGAVP ADAGRADPAA PEQGRGGRVV  120
GGAHLRSLSV DAAFFESLGF PSADTSGGGG GGGGAVEKRP HHRRGASMDG STSPFEGESA  180
PLPFDYAKKA MADGRLAEIL ANRQSAARSK ERKIRYTSEL EKKVQTLQTE ATTLSAQLTL  240
LQRAAVVIAL CLLSLGGIYK VDALY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912402.17e-82PREDICTED: transcription factor VIP1-like
SwissprotQ9MA753e-33VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0B4J3J14e-61A0A0B4J3J1_MAIZE; Uncharacterized protein
TrEMBLC0PBN05e-62C0PBN0_MAIZE; BZIP transcription factor
STRINGGRMZM5G821024_P011e-60(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.15e-16VIRE2-interacting protein 1