PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco001167.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 388aa    MW: 43647.5 Da    PI: 6.9121
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco001167.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.6e-1098139341
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                  + k +rr+++NReAAr+sR+RKka++++Le    k ++Le+e
  Aco001167.1  98 SEKIQRRLAQNREAARKSRLRKKAYVQQLESsriKLAQLEQE 139
                  56889************************9722244555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-891145No hitNo description
SMARTSM003381.7E-796159IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.28998142IPR004827Basic-leucine zipper domain
PfamPF001702.7E-7100136IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.3E-7100143No hitNo description
CDDcd147081.25E-20100152No hitNo description
PROSITE patternPS000360103118IPR004827Basic-leucine zipper domain
PfamPF141444.4E-31187261IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MMELYPGYLE EHFHHLNPSS NSMTTASTQF VTSRRMGIYE PNHQMSMWDE SFKAESSQNT  60
SASTVLEADA KLDNKLLDVP HETFGPSKKY DQEANKPSEK IQRRLAQNRE AARKSRLRKK  120
AYVQQLESSR IKLAQLEQEL ERARQQGVYI AGHLGESTLG LTGAVDSGIA AFKMEYDHWV  180
AEQCRQTCEL RAALQAHVSD IELRMLVESG MSHYNNLFQI KAIAAKSDVF YLMSGMWKTA  240
AERFFLWIGG FRPSELLKVL SPHLDTLTEQ QVSAVCSLQH SSEQAEDALS QGLDKLQQTL  300
AETLTSYPLG ASDVGNYMEQ MANAMGKLEA LVSFVKQADL LRQQTLQQMC TILTTRQAVR  360
GLLALGDYFQ RLRTLSSLWA ARPREPA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905948.10.0PREDICTED: transcription factor TGA4-like isoform X1
SwissprotQ392371e-161TGA1_ARATH; Transcription factor TGA1
TrEMBLM0SZ420.0M0SZ42_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P16630_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-151bZIP family protein