PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn353711
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family TCP
Protein Properties Length: 782aa    MW: 86961 Da    PI: 7.936
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn353711genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.13.2e-3830120289
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...k 89 
                 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlq a+pai+++tgt++++as+  a+  s+s+++ss++   +
  Achn353711  30 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQHAEPAIIAATGTGTIPASALAAAGGSVSHHASSISaglH 120
                 789******************************************************************8886666666655555554431 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.8E-2935240IPR005333Transcription factor, TCP
PROSITE profilePS5136928.0083690IPR017887Transcription factor TCP subgroup
SuperFamilySSF550211.62E-11339408No hitNo description
Gene3DG3DSA:3.30.70.2603.7E-4342405No hitNo description
PROSITE profilePS5167110.379344423IPR002912ACT domain
Gene3DG3DSA:3.30.70.2603.1E-17427501No hitNo description
SuperFamilySSF550213.17E-13428502No hitNo description
CDDcd049259.29E-35432505No hitNo description
PROSITE profilePS5167111.182433514IPR002912ACT domain
PfamPF018426.0E-7433499IPR002912ACT domain
SuperFamilySSF550219.51E-11681750No hitNo description
CDDcd049263.27E-37682753No hitNo description
Gene3DG3DSA:3.30.70.2602.0E-12683751No hitNo description
PROSITE profilePS5167113.652684763IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
Sequence ? help Back to Top
Protein Sequence    Length: 782 aa     Download sequence    Send to blast
MTENNNKPAE IKDFQIVIAD KEDTTKKQLA PKRSSNKDRH TKVEGRGRRI RMPALCAARI  60
FQLTRELGHK SDGETIQWLL QHAEPAIIAA TGTGTIPASA LAAAGGSVSH HASSISAGLH  120
QKLDDLGGQS RANWSMVGGN LNLGRPHLAT MAAMWPTAGF GFQSSSSSSG PSTANLGSEG  180
SNYLQRSGFP GFELSGNNMG SMSFASILGG NGHQVPGLEL GLSQDGPVGV LNSQALSQMH  240
QQMGQARMHH HQHQNQHQHQ YNQQSSPKDD SQGPLVKKHW PSNRLTSAFM QMSPTNREMM  300
KIAIGGIVEP LLYPKSLTRV HTYPRKHNFF CVVIDNNTCK DATVIQIDSF NKHGILLEVV  360
QVLTDLNLVI TKAYISSDGG WFMDVFNVVD RDGNKIRDEK VINYIRKTLE NDSFFLPPLR  420
ESVGVMPSEE HTSIELAGTD RPGLLSEVCA VLADLCCNVV NAEIWTHNSR AAAVIHIADD  480
STGCAIKDPN RLSTIKELLC NVLKGNNDLK TAKMTLSPPG VTHRERRLHQ IMFADRDYER  540
NVRAEHGRVE DISLRPHVTV MDCMEKDYTM ITMRSKDRPK LLFDTVCTLT DMQYVVFHGV  600
VHTGRMEAVQ VWTIYGIISS LLCFAHWTYI NYYPFHLIWQ HYVWIKEYYI RHVDGLPIGS  660
EAERERVMQY LEAAIERRAS GGLELELCSE DRVGLLSDIT RIFRENSLCI KRAEISTRGG  720
KAEDTFYVTD VTGNAVDPKT IDSIRQEIGK SVLRVKRNSS PSSKPLQETA MSFLFGSLFK  780
V*
Functional Description ? help Back to Top
Source Description
UniProtMay bind amino acids. {ECO:0000303|PubMed:12481063}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028084062.10.0ACT domain-containing protein ACR6-like
SwissprotQ9SGA00.0ACR6_ARATH; ACT domain-containing protein ACR6
TrEMBLA0A2R6P8W40.0A0A2R6P8W4_ACTCH; ACT domain-containing protein
STRINGVIT_14s0068g01670.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.14e-70TCP family protein
Publications ? help Back to Top
  1. Hsieh MH,Goodman HM
    Molecular characterization of a novel gene family encoding ACT domain repeat proteins in Arabidopsis.
    Plant Physiol., 2002. 130(4): p. 1797-806
    [PMID:12481063]