PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn341381
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 231aa    MW: 25266.5 Da    PI: 5.1454
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn341381genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like42.81.1e-132754128
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAt 28
                kprlrWt+eLHerFv+av+qLGG++  t
  Achn341381 27 KPRLRWTSELHERFVDAVTQLGGPDMST 54
                79**********************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.8E-122455IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-82754IPR006447Myb domain, plants
PfamPF143794.2E-2670116IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MYSAIHSLPL DGGVGVDACL VMTSDPKPRL RWTSELHERF VDAVTQLGGP DMSTSHQSWN  60
SEEEKKIGYQ VTEALRVQME VQRRLHDQLE VQRRLQLRIE AQSKYLQSIL EKACKALDDH  120
AAATAGLEAA KEELSDLAIK VSNDFNEMVP SLSEITASLE NKNASNLATR FGDCSVDSCL  180
TSNGSPISPM GAASQAAALK KRSRPFFVNG DSVPLESSVR QVEWMMTNIG *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024197454.11e-102protein PHR1-LIKE 2 isoform X2
SwissprotQ94A571e-73PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLA0A2R6RXY71e-134A0A2R6RXY7_ACTCH; Protein PHR1-LIKE like
STRINGXP_002518104.11e-101(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37912344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.12e-67G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]