PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn317281
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family TCP
Protein Properties Length: 349aa    MW: 36583.5 Da    PI: 8.2365
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn317281genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.57e-36731711101
         TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssg....ka 90 
                 aa+++++++++hTkv+gR+RR+Rl+a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a ++                 +++    k+
  Achn317281  73 AAARRSSTKDRHTKVEGRGRRIRLPATCAARIFQLTRELGHKSDGETVRWLLEHAEEAIIEATGTGTVPAIAVsvggtL-----------KIPtslaKN 160
                 5899*************************************************************88888444222210...........111111122 PP

         TCP  91 aksaakskksq 101
                 +++ +++++++
  Achn317281 161 ESEGPNKRRRR 171
                 22222222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.5E-2979158IPR005333Transcription factor, TCP
PROSITE profilePS5136926.97880134IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MSSFQDHEFE PDDDGGGISD LSISADRPES STRPVFKEEP IDSDPKPNNV SIPIGMMPLM  60
QMQVVPAPMP VAAAARRSST KDRHTKVEGR GRRIRLPATC AARIFQLTRE LGHKSDGETV  120
RWLLEHAEEA IIEATGTGTV PAIAVSVGGT LKIPTSLAKN ESEGPNKRRR RASSSEFYDV  180
NAGSDGVSQA AGLAPVVPTA AAPQGMVPIW AVSNAGMMIP SNAVWVIPQA EAAAPVAVAT  240
GLNQPQLWTI SSSVTPVFNM TARPISSLVS VAQSVTAVSP AVCGSLMTAE TASGGAAKAG  300
AKKSSMAPAS VSSKAQMLRD FSMEIYDKRE LQFMGRTASQ QTQSTSKP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028063287.11e-150transcription factor TCP19-like
TrEMBLA0A2R6QNF30.0A0A2R6QNF3_ACTCH; Transcription factor like
STRINGVIT_02s0025g04590.t011e-117(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137311112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.12e-57TCP family protein