PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn316681
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ZF-HD
Protein Properties Length: 128aa    MW: 13838.1 Da    PI: 4.4676
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn316681genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer41.43.3e-13952553
  ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFH 53
                 +Y  C +N   ++G + vDGCg f ++      + +++C ACgC  +FH
   Achn316681  9 EYGACWRNFGGEVGRYIVDGCGQFAQD-----AQGSTNCEACGCDNSFH 52
                 79**********************998.....45799************ PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047702.5E-11952IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257741.0E-41052IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152314.9591055IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MEGERFFLEY GACWRNFGGE VGRYIVDGCG QFAQDAQGST NCEACGCDNS FHLTLTLTLT  60
LTHINIHDNN GIGGRAPQPS HSQESVITEV ENNVTTPLVD DDYDEVSCAE KSTDSSGSNK  120
KKKKNIT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14687.12e-07homeobox protein 32