PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn288721
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family TCP
Protein Properties Length: 458aa    MW: 48333.3 Da    PI: 7.4842
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn288721genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.41.5e-39682101112
         TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 
                 aa++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlq a+pai ++tgt++++a+++  ++s +ss+s+ s++          
  Achn288721  68 AAAAKRPTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQHAEPAIVAATGTGTIPANFStLNVSLRSSGSTISAPpsksaphsfh 166
                 5789******************************************************************99988888888888444446666778888 PP

         TCP  89 ....................kaaksaakskksqksaasalnlak 112
                                     +++  +++++++q++++++++l  
  Achn288721 167 galalahhpyeegfshmlgfQHQLHHHQQQQQQQQQSQHQQLLT 210
                 88889999999999999998555555555555555555555444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.6E-4075207IPR005333Transcription factor, TCP
PROSITE profilePS5136927.69875129IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MELSDLHNNN NKQTNTTTTA TASSHRAVNF DFRSGVGAAS GAPPPQLVDA SLAIATRSEQ  60
QITVAAPAAA AKRPTKDRHT KVDGRGRRIR MPATCAARVF QLTRELGHKS DGETIEWLLQ  120
HAEPAIVAAT GTGTIPANFS TLNVSLRSSG STISAPPSKS APHSFHGALA LAHHPYEEGF  180
SHMLGFQHQL HHHQQQQQQQ QQSQHQQLLT AEQIADAMPG GGDGGGNSTE NYLRKRFRED  240
LFKEESQSQQ GDASAAPSSP SNKQFKGGLQ LPKQQDQAGP SSSMLRHPNM MPTGMWAVAP  300
APSSGAGSTF WMLPVTAAGG GGAGGSGQTV SLAAAPTSGA GPDPPQVWPF AAAAPAASGV  360
TLQAPLFLPR FNIPGNLEFQ GGRAGSLQLG SMLMQQQPSQ TNLGMLAALN AYSIGGLNMN  420
SEQNNRLEHH QHQQHQHQHQ HQPQTTDSGE DDPNSSQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028088914.10.0transcription factor TCP8-like
RefseqXP_028088915.10.0transcription factor TCP8-like
TrEMBLA0A2R6RGJ90.0A0A2R6RGJ9_ACTCH; Transcription factor like
STRINGEOX971601e-166(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114842125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.11e-65TCP family protein