PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn005621
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 289aa    MW: 32353.4 Da    PI: 7.745
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn005621genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941e-29149207259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++prsYY+C+s  gC ++k+v+rs++dp++++itY+ +H h+
  Achn005621 149 SDMWAWRKYGQKPIKGSPYPRSYYKCSSLkGCLARKQVDRSQTDPEMFVITYTADHCHS 207
                 79*************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-30134209IPR003657WRKY domain
PROSITE profilePS5081130.871143209IPR003657WRKY domain
SuperFamilySSF1182904.97E-25146209IPR003657WRKY domain
SMARTSM007743.7E-34148208IPR003657WRKY domain
PfamPF031067.7E-24150206IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MLRRPTGLVV RCSYFLMSID HYFAGTGDAD LEAVVRGYNH PQTCFSPLIF QQDDHDFVLS  60
TFPDLFKTSS TLFDELEELY KPFYHQSLIS SSDSGSGGER EPEKVQETKE AFCGSTTSVA  120
AGALGVKQKR RKTQHKRVVT EVRADGLSSD MWAWRKYGQK PIKGSPYPRS YYKCSSLKGC  180
LARKQVDRSQ TDPEMFVITY TADHCHSQPT RRSSLAGTTR KKFSLSKTTA AANLSCAPIS  240
SSSSLSPPPK EEEQQMDQRS ELVMRDMVLG DEFFVGFDEL DYSGFSCR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-17136210680Disease resistance protein RRS1
5w3x_D1e-17136210680Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028115579.13e-87probable WRKY transcription factor 29
TrEMBLA0A2R6QIZ60.0A0A2R6QIZ6_ACTCH; WRKY transcription factor
STRINGVIT_02s0025g00420.t012e-71(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-58WRKY family protein