PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA60G00147
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 189aa    MW: 20286.6 Da    PI: 4.3676
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA60G00147genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-181363255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++k++g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a  +l+g
  AA60G00147 13 LYRGVRQRKNSGKWVSEIREPK----KpNRIWLGTFSTPEMAAIAYDVASIALKG 63
                69******************94....468*******************9988876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-111263IPR001471AP2/ERF domain
CDDcd000181.30E-291273No hitNo description
SMARTSM003803.8E-321377IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-191373IPR016177DNA-binding domain
PROSITE profilePS5103221.2321371IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-271373IPR001471AP2/ERF domain
PRINTSPR003673.9E-51425IPR001471AP2/ERF domain
PRINTSPR003673.9E-53753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEESRNNGGR HPLYRGVRQR KNSGKWVSEI REPKKPNRIW LGTFSTPEMA AIAYDVASIA  60
LKGTQTDLNF PNSASSLPVP LSTSASDIQA AAASAAAAFG AANDAIVRVK EGETSSGVVK  120
DVVEECGDVM SNDGFVDEDL IFDMPNVIMN MAEGMMLSPP RFNGGNVFGG DEGFEGFNGG  180
NDDYLWKFP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013691481.17e-75PREDICTED: ethylene-responsive transcription factor ERF024
RefseqXP_009141595.17e-75PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR03e-72ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A078JYM08e-75A0A078JYM0_BRANA; BnaAnng34830D protein
TrEMBLM4DL548e-75M4DL54_BRARP; Uncharacterized protein
STRINGBra017235.1-P2e-74(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM64242546
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.15e-64ERF family protein