PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA5G00115
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 205aa    MW: 23185 Da    PI: 7.1788
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA5G00115genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.1e-194594255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa a+++ ++k++g
  AA5G00115 45 HYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAALAYDESALKFKG 94
               7********.**********7.....337***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-3244103IPR001471AP2/ERF domain
SMARTSM003801.8E-3545108IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2245103IPR016177DNA-binding domain
CDDcd000181.72E-3145103No hitNo description
PROSITE profilePS5103224.36845102IPR001471AP2/ERF domain
PfamPF008471.5E-124594IPR001471AP2/ERF domain
PRINTSPR003671.2E-114657IPR001471AP2/ERF domain
PRINTSPR003671.2E-116884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MRVMVSALTQ VIGNQTNSHH NISPIDQHVA APNTTQEQGD LKKRHYRGVR QRPWGKWAAE  60
IRDPHKAARV WLGTFETAEA AALAYDESAL KFKGSKAKLN FPERVQLRSD IINNSTYNNN  120
YSYNQNYNSN SQIDFQPQTI PNYNNQYYYQ SGSSNEGFSV SYDYGLSSAT TTTSSSAGSS  180
SRQQEDQEEE EYGRFLRFGD SSSSH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-2842105266ATERF1
3gcc_A3e-2842105266ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_200995.18e-68ethylene-responsive transcription factor ERF114
SwissprotQ9FH541e-69EF114_ARATH; Ethylene-responsive transcription factor ERF114
TrEMBLD7MKN81e-67D7MKN8_ARALL; Putative uncharacterized protein
STRINGAT5G61890.13e-67(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-46ERF family protein