PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA53G01387
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 226aa    MW: 24307.3 Da    PI: 4.621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA53G01387genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.31.4e-1666115155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+ +l+g
  AA53G01387  66 PVYRGIR-CR-SGKWVSEIREPKK---TTRIWLGTYATPEMAAAAYDVAAIALKG 115
                 68****9.55.6*********854...5**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-966115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2667125IPR001471AP2/ERF domain
SMARTSM003801.5E-2867129IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-1867125IPR016177DNA-binding domain
PROSITE profilePS5103219.2367123IPR001471AP2/ERF domain
PRINTSPR003671.9E-66879IPR001471AP2/ERF domain
CDDcd000181.77E-1668125No hitNo description
PRINTSPR003671.9E-6105125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MADSNNNNNP PVDAITQTST TLPPRTCEDT TLSVSLTCQI PSPVDTPTST TVSSTAVANS  60
RRKKHPVYRG IRCRSGKWVS EIREPKKTTR IWLGTYATPE MAAAAYDVAA IALKGGEALL  120
NFPESVGSYP VPVSTSAVHI RIAAAAAAAA TVVKKKEKEE DVTSRQCDDV AGSSTMMEFI  180
DEEELLNMPK LLEDMAKGMM VDPPWLGSPP SDDSPENSDG ESLWSY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00138DAPTransfer from AT1G12630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009112987.11e-80PREDICTED: ethylene-responsive transcription factor ERF026-like
RefseqXP_013673463.11e-80PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9CAN91e-73ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLA0A087HEJ53e-82A0A087HEJ5_ARAAL; Uncharacterized protein
STRINGBra027615.1-P3e-80(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19572777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.12e-41ERF family protein