PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA53G00826
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 308aa    MW: 34020.6 Da    PI: 4.2372
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA53G00826genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.21.1e-1483130152
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                 s+  GVr++k +g+W+AeIr+p     + +r +lg++ t e+Aa a+   +++
  AA53G00826  83 SKPVGVRQRK-WGKWAAEIRHPI----TkTRTWLGTYETLEQAADAYASKKLE 130
                 7899*****9.**********72....36******************877665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.86E-1883129No hitNo description
PfamPF008471.3E-983130IPR001471AP2/ERF domain
SMARTSM003803.2E-1384138IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-1484131IPR016177DNA-binding domain
PROSITE profilePS5103217.93884143IPR001471AP2/ERF domain
PRINTSPR003672.3E-68596IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-1987131IPR001471AP2/ERF domain
PRINTSPR003672.3E-6107123IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MRKIRFVVND PYATDYSSSE DEIDHKKKRF VCEINLPFSQ ATQAESESSY CKESNNTQEK  60
SKVSACSKRV LSKPSGDGRS PVSKPVGVRQ RKWGKWAAEI RHPITKTRTW LGTYETLEQA  120
ADAYASKKLE FDALTAAKSS QNPDPNPPLA SSEITESSVS SSNASHDSDT QASASGSNLD  180
TMSSIEPEKN PVASIINPQA GESKKTTFDF NLADLQIPDM GCFIDESLMP NELDFLLTEE  240
SNQLMDDYCF DDMNIIGFED DGPSELPDYD FSDVEIDLDL GLIGTMDKFT FVDHITTTTT  300
TPLNIACP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3533194e-45AK353319.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-28-P02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006395614.11e-150hypothetical protein EUTSA_v10004526mg
SwissprotQ9LUA21e-123EF119_ARATH; Ethylene-responsive transcription factor ERF119
TrEMBLE4MXS21e-150E4MXS2_EUTHA; mRNA, clone: RTFL01-28-P02
TrEMBLV4K5P71e-150V4K5P7_EUTSA; Uncharacterized protein
STRINGscaffold_500470.11e-134(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25372671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.21e-118ERF family protein