PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA37G00190
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 191aa    MW: 20843.4 Da    PI: 8.3418
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA37G00190genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19553153
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                ++++GVr+++ +g+WvAeIr+p        +r++lg+f taeeAa+a+++a+  +
  AA37G00190  5 KKFRGVRQRH-WGSWVAEIRHP-----LlkRRIWLGTFETAEEAARAYDEAAVLM 53
                59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.83E-34565No hitNo description
SuperFamilySSF541714.51E-21664IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.9E-33663IPR001471AP2/ERF domain
PROSITE profilePS5103222.155663IPR001471AP2/ERF domain
SMARTSM003802.8E-38669IPR001471AP2/ERF domain
PfamPF008471.5E-12650IPR001471AP2/ERF domain
PRINTSPR003671.2E-10718IPR001471AP2/ERF domain
PRINTSPR003671.2E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0010143Biological Processcutin biosynthetic process
GO:0010166Biological Processwax metabolic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MVQSKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT  60
NFPVLGETCE GKTDNSASSS SSSSSSLSSI LSAKLRKCCK SPSPSLTCLR LDTSNSHIGV  120
WQKRAGSKSD SSWVMTVELD PKLTTTYNAA SHDISHGSQE AALPSASALS QGLDEEEKVA  180
LQMIEELLNT N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-17564161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-17364264ATERF1
3gcc_A3e-17364264ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0052206e-65BT005220.1 Arabidopsis thaliana At1g15360 mRNA, complete cds.
GenBankAY3781016e-65AY378101.1 Arabidopsis thaliana transcription factor wax inducer 1 (WIN1) mRNA, complete cds.
GenBankAK1179416e-65AK117941.1 Arabidopsis thaliana At1g15360 mRNA for putative ethylene responsive element, complete cds, clone: RAFL19-13-G20.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010476622.14e-91PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI333e-92WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLV4L6852e-89V4L685_EUTSA; Uncharacterized protein
STRINGAT1G15360.17e-90(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM83428116
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.14e-79ERF family protein