PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA26G00731
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bHLH
Protein Properties Length: 451aa    MW: 48878.3 Da    PI: 6.2248
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA26G00731genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.53.3e-053633971554
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++ ++++ L++l+ +      +K + a++L +A+eYIk L
  AA26G00731 363 KMGDRIAALQQLVSPF-----GKTDAASVLSEAIEYIKFL 397
                 677999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.03348397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-4358402No hitNo description
SuperFamilySSF474592.09E-9361403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-9362405IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MLSIIEAETT TKLTMGDHEL GNTGSGSSWW KLSSSSSSSS SSSTSALAAC NNTLGAFTWA  60
STETLPDKKQ HRSSNSIDSG ASTVFHDHHL QMIGLGLSSQ SPVIDQWNHQ SLLRGDSKAE  120
TSFGLMLQEN LNLDANVNAN ANNTTSSSYQ LQQESGSSSH HQALWRDSSN RGFFLDHHHQ  180
QFSPHGSSSD SSTVTCQGFG VDNSSNTLYA TNSSSTMFNQ IDQRNQQSPL VYSQYGSSSG  240
NYDQIQMSPA TAATAMPSTW FLRSSPPPKP HSPLRFSNNG TFWNPAATGS NAGPHDVSSN  300
FFPTLQPPQI HAPSFDEQPK GISEIRDSSS GEGKRGGGEQ PAAKRAKSET VSPSPSFKVK  360
KEKMGDRIAA LQQLVSPFGK TDAASVLSEA IEYIKFLHQQ VSNEHERDLE VVEEEDLRSR  420
GLCLVPVSST FPMTHDTTVD FWTPTFGGTF R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013614574.10.0PREDICTED: transcription factor bHLH123-like isoform X1
SwissprotQ8GXT31e-168BH123_ARATH; Transcription factor bHLH123
TrEMBLA0A0D2ZTA40.0A0A0D2ZTA4_BRAOL; Uncharacterized protein
TrEMBLA0A078GXW80.0A0A078GXW8_BRANA; BnaC05g32220D protein
STRINGBra035761.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40242553
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-138bHLH family protein