PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA102G00261
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 188aa    MW: 21007.7 Da    PI: 6.5299
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA102G00261genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-182979256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                 +y+GVr +  +g+Wv+eIr+p+    + +r++lg+++ +e+Aa+a++aa  +++ge
  AA102G00261 29 CYRGVRKRA-WGKWVSEIRVPK----TgRRIWLGSYDAPEKAARAYDAALYCIRGE 79
                 8*****887.**********95....35**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.4E-332992IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-202987IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.6E-282987IPR001471AP2/ERF domain
PROSITE profilePS5103221.972986IPR001471AP2/ERF domain
PfamPF008471.9E-112979IPR001471AP2/ERF domain
CDDcd000186.56E-323088No hitNo description
PRINTSPR003672.9E-93041IPR001471AP2/ERF domain
PRINTSPR003672.9E-95268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MDMMPPSAPK SPFLSSSLEE VQEDRKFKCY RGVRKRAWGK WVSEIRVPKT GRRIWLGSYD  60
APEKAARAYD AALYCIRGER GVFNFPTDKK PQLPESSGRA LSKQDIQTIA TNYASSVVPV  120
PSHATLPTAQ VPSQVPASPD VFSSTEITEI ANDHYVQANT TSGSTFSIED IQLDNFFMMD  180
IDWINNLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-162686263ATERF1
3gcc_A8e-162686263ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002869347.11e-106hypothetical protein ARALYDRAFT_913363
SwissprotQ6NLD51e-107ERF15_ARATH; Ethylene-responsive transcription factor ERF015
TrEMBLD7MBJ31e-106D7MBJ3_ARALL; Putative uncharacterized protein
STRINGscaffold_701105.11e-106(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM148991620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.11e-108ERF family protein