PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020284
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 214aa    MW: 23225.1 Da    PI: 8.581
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-110201PU_refplantGDBView CDS
gnl|UG|Aan#S41929053PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.001378100123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ykC+ C+k F +   L  H  +H
  Aan020284  78 YKCSVCNKAFGSYQALGGHKASH 100
                9*********9999998888777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.63E-777100No hitNo description
PfamPF139128.0E-1477102IPR007087Zinc finger, C2H2
SMARTSM003550.01778100IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.1878105IPR007087Zinc finger, C2H2
PROSITE patternPS00028080100IPR007087Zinc finger, C2H2
SuperFamilySSF576671.63E-7137164No hitNo description
PROSITE profilePS501579.286142164IPR007087Zinc finger, C2H2
PfamPF139121.1E-9142166IPR007087Zinc finger, C2H2
SMARTSM003555.1142164IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280144164IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MALEAFNSPL FRQESFNNLC YLESWTKGKR SKRPRSTTHD QPPTEEEYLA LCLMLLARGG  60
PPSKKSLVDH GIDSKDVYKC SVCNKAFGSY QALGGHKASH RKNNVNSNGG KVLHVDVEHT  120
SVVVATTSTS TTTTTSGTGK SHECSICHRC FSTGQALGGH KRCHYEGIVG GSHVSTGQRG  180
FDLNLPAMPE NIFSGIADDE VESPHPSKKA RMFA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.92850.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, stems and leaves. {ECO:0000269|PubMed:10806347, ECO:0000269|PubMed:15333755, ECO:0000269|PubMed:8662738, ECO:0000269|PubMed:9132053}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor involved in abiotic stress responses. Can repress the stress responsive genes DREB1A and LTI78. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. {ECO:0000269|PubMed:12032082, ECO:0000269|PubMed:15333755, ECO:0000269|PubMed:17112521, ECO:0000269|PubMed:18216250, ECO:0000269|PubMed:20140232, ECO:0000269|PubMed:8662738}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, cold and drought stresses. Down-regulated by gibberellin. {ECO:0000269|PubMed:10806347, ECO:0000269|PubMed:11351099, ECO:0000269|PubMed:12837949, ECO:0000269|PubMed:15333755, ECO:0000269|PubMed:17112521, ECO:0000269|PubMed:8662738}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021983471.18e-93zinc finger protein ZAT10-like
SwissprotQ962892e-53ZAT10_ARATH; Zinc finger protein ZAT10
TrEMBLD3J0T71e-130D3J0T7_CHRMO; Cys2/His2-type zinc finger protein
STRINGXP_009630807.19e-70(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.14e-53salt tolerance zinc finger
Publications ? help Back to Top
  1. Li C,Chang PP,Ghebremariam KM,Qin L,Liang Y
    Overexpression of tomato SpMPK3 gene in Arabidopsis enhances the osmotic tolerance.
    Biochem. Biophys. Res. Commun., 2014. 443(2): p. 357-62
    [PMID:24275141]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Shi H,Chan Z
    The cysteine2/histidine2-type transcription factor ZINC FINGER OF ARABIDOPSIS THALIANA 6-activated C-REPEAT-BINDING FACTOR pathway is essential for melatonin-mediated freezing stress resistance in Arabidopsis.
    J. Pineal Res., 2014. 57(2): p. 185-91
    [PMID:24962049]
  4. Munekage YN,Inoue S,Yoneda Y,Yokota A
    Distinct palisade tissue development processes promoted by leaf autonomous signalling and long-distance signalling in Arabidopsis thaliana.
    Plant Cell Environ., 2015. 38(6): p. 1116-26
    [PMID:25293694]
  5. van Buer J,Cvetkovic J,Baier M
    Cold regulation of plastid ascorbate peroxidases serves as a priming hub controlling ROS signaling in Arabidopsis thaliana.
    BMC Plant Biol., 2016. 16(1): p. 163
    [PMID:27439459]
  6. Corrales AR, et al.
    Multifaceted role of cycling DOF factor 3 (CDF3) in the regulation of flowering time and abiotic stress responses in Arabidopsis.
    Plant Cell Environ., 2017. 40(5): p. 748-764
    [PMID:28044345]
  7. Nguyen HM, et al.
    Ethanol Enhances High-Salinity Stress Tolerance by Detoxifying Reactive Oxygen Species in Arabidopsis thaliana and Rice.
    Front Plant Sci, 2017. 8: p. 1001
    [PMID:28717360]
  8. Geilen K,Heilmann M,Hillmer S,Böhmer M
    WRKY43 regulates polyunsaturated fatty acid content and seed germination under unfavourable growth conditions.
    Sci Rep, 2017. 7(1): p. 14235
    [PMID:29079824]
  9. Liu X, et al.
    Histone Deacetylase AtSRT1 Links Metabolic Flux and Stress Response in Arabidopsis.
    Mol Plant, 2017. 10(12): p. 1510-1522
    [PMID:29107034]
  10. Huang K, et al.
    Arabidopsis calcium-dependent protein kinase AtCPK1 plays a positive role in salt/drought-stress response.
    Biochem. Biophys. Res. Commun., 2018. 498(1): p. 92-98
    [PMID:29196259]