PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan019054
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family FAR1
Protein Properties Length: 238aa    MW: 27074.8 Da    PI: 7.7013
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-79939PU_refplantGDBView CDS
gnl|UG|Aan#S41955061PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.49.9e-2359152190
       FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 
                +fY++YAk++GFsvr+++++ +    + +t+r+f C + g+++ + +++++ +r+r+++r+gC+a +++ +++     +w+++ ++++HnHel+
  Aan019054  59 EFYCSYAKQCGFSVRRNRTRGKdGVGKGVTRRDFICHRGGYPQFKPSEDVNVQRNRKSSRCGCQAYMRIVRRSdfnVPEWRIIGFSNDHNHELS 152
                6****************99987456677********************9*******************99998776789*************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.6E-1959152IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MHEITSMMEE TSENSTDLSA DDIGTIEEIP ENSILSRQGS VNLVPFIGQR FVSQEAAYEF  60
YCSYAKQCGF SVRRNRTRGK DGVGKGVTRR DFICHRGGYP QFKPSEDVNV QRNRKSSRCG  120
CQAYMRIVRR SDFNVPEWRI IGFSNDHNHE LSKSMDVQMP LPAYCAMSAD DKSRICMFAK  180
AGMSVRQMLR LMELEKGVKL GCLLFTEIDV RNLLQSFKTV DRDNDAIDLL KNVQGQEG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010652225.11e-136PREDICTED: protein FAR1-RELATED SEQUENCE 11-like
RefseqXP_010652226.11e-136PREDICTED: protein FAR1-RELATED SEQUENCE 11-like
SwissprotQ9SY664e-78FRS11_ARATH; Protein FAR1-RELATED SEQUENCE 11
TrEMBLA0A103Y8W91e-139A0A103Y8W9_CYNCS; Uncharacterized protein
STRINGVIT_07s0005g01120.t011e-135(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-79FAR1-related sequence 11