PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan008801
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB_related
Protein Properties Length: 205aa    MW: 22829.7 Da    PI: 4.5554
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41934198PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-38829PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.96.2e-102362240
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg.kgRtlkqc 40
                     ++W t E++ll+ av+++G+++W++Ia+++   + + +q+
        Aan008801 23 DAWGTSEELLLASAVNRYGTKNWDLIASEIKiRTASSNQI 62
                     58****************************9777777775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.56E-62062IPR009057Homeodomain-like
SMARTSM007178.8E-72179IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-62482IPR009057Homeodomain-like
PfamPF002492.6E-92462IPR001005SANT/Myb domain
CDDcd001677.23E-82477No hitNo description
PROSITE profilePS500906.1562577IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MAVDNTPSST AKSDHHHHAP PPDAWGTSEE LLLASAVNRY GTKNWDLIAS EIKIRTASSN  60
QIYFTPVHCQ QKYKELKRRF NDDNDDDVTD DVISIPWLDD LKKERIVWLQ NHLQNLDPRI  120
SSLQLTVKKL KEEREKPAEK AEPVAVVSSG TGEDESDRSV NGSNGNVETN EPEKSPVRTG  180
EEKPVGSEPV KSEPGGNESE EGDDX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021972256.19e-46uncharacterized protein LOC110867585
TrEMBLA0A2U1NP531e-116A0A2U1NP53_ARTAN; DNA-binding bromodomain-containing protein
STRINGGorai.006G142400.13e-34(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44430.11e-17DNA-binding bromodomain-containing protein