PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan006857
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family FAR1
Protein Properties Length: 266aa    MW: 30626.7 Da    PI: 5.4876
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41949975PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-61848PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.41.2e-2885188191
       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                +fY+eYA+++GFs+ +++s++sk+++e+++++f Cs++g+++e++k+              e+++ +r+ ++t+Cka+++vk+++dgkw ++++e++HnH
  Aan006857  85 SFYQEYARSMGFSTAIQNSRRSKTSREFIDAKFACSRYGTKREQDKSfnrprsrqgsnqdPENASGRRSCSKTDCKASMHVKRRSDGKWIIHRFEKDHNH 184
                5**************************************************999998877666777999******************************* PP

       FAR1  88 elap 91 
                +l p
  Aan006857 185 DLLP 188
                *975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.9E-2785188IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MDINLRLPSG EHEKEDKDEA KEMTIFMDDD KMNNEDDLGR EIEKLPSDSD GAMISTSLDL  60
VDFKEDINLE PISGMEFESH GEAYSFYQEY ARSMGFSTAI QNSRRSKTSR EFIDAKFACS  120
RYGTKREQDK SFNRPRSRQG SNQDPENASG RRSCSKTDCK ASMHVKRRSD GKWIIHRFEK  180
DHNHDLLPAQ AVSEQTRKMY AAMARQFAEY KNVVGLKIEA SNPFDKSRNM AFETGEANTL  240
CRFFAQMQSI NSNFFYAIDV GEDQRX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002268503.11e-132PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3
RefseqXP_010648199.11e-132PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3
RefseqXP_010648200.11e-132PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3
SwissprotQ9LIE51e-114FHY3_ARATH; Protein FAR-RED ELONGATED HYPOCOTYL 3
TrEMBLF6HTM81e-132F6HTM8_VITVI; Putative uncharacterized protein
STRINGVIT_03s0017g01780.t011e-132(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.21e-113far-red elongated hypocotyls 3