PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan005276
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 405aa    MW: 44114.1 Da    PI: 9.1502
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-53160992PU_refplantGDBView CDS
gnl|UG|Aan#S41932355PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.92e-06172194223
                EETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                +C++Cgk F  ++nL+ H  + H
  Aan005276 172 TCHKCGKQFGKWENLEAHHLSeH 194
                7*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.037171199IPR007087Zinc finger, C2H2
PROSITE patternPS000280173194IPR007087Zinc finger, C2H2
SuperFamilySSF563993.36E-22196404No hitNo description
Gene3DG3DSA:3.90.228.104.3E-9216378IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
XKKSLHCKSD PREVHEPKSK PHLGAILTRK PARSGCSRSI ANLKDVINGG SKRHEKPVDC  60
SPRSIGSNEF VNPITHEVIL SDSRCELKIT GFNGGFSDIS NGGNGDVTLH SVKNHQQTST  120
TRRTLSLNSA KALDRNGIAT GGGVTGKNGT TQKPKVTLET ESYGSSVGGA VTCHKCGKQF  180
GKWENLEAHH LSEHAVTELM EGDSSRKIVE IICRSSLVKA ENNSGRIEKV LKVHNMQKTL  240
ARFEEYRELV KTNASKLPKK HSRCLADGNE LLRFYGTTIA CSLGINGETS LCISDKCCVC  300
RIIRHGFSTN KELKGGVGVF TTSTSAKAFE SIEVFDDSLD TRKALMVCRV IAGRVHRPLE  360
NIQEITEQTG FDSLAGKVGL HSNIEDLYLL SPKALLPCFV VICKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023764228.10.0uncharacterized protein LOC111912727
TrEMBLA0A2U1PE020.0A0A2U1PE02_ARTAN; Zinc finger, C2H2
STRINGXP_010267823.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-150C2H2 family protein