PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK24130.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family NAC
Protein Properties Length: 245aa    MW: 28383.4 Da    PI: 5.5948
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK24130.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.51.6e-2091603128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka..eekewyfFskrdkkya....tgkrknra........tksgyWkatg 87 
                  Gf+F+P ++el+++yL ++++g+++   ++i + ++y++ePw L+++++   +++ewy+F++r + ++     gk+++r+        +++g Wka  
  KFK24130.1   9 EGFHFEPYEDELIKDYLIPELKGESCY--DFIVHKNVYDMEPWLLDHNMDPffQKNEWYYFVTRVQVSEkkigYGKQAKRKiagdnndgIERGNWKANA 105
                 59**********************954..58999***********96554455889*****998766653333577888866788888888*****998 PP

         NAM  88 kdkevlskkgelvglkktLvfy.......kgrapkge.......ktdWvmheyrl 128
                 +++   +k+g+ +g k+tL++        ++++++g+       +++W+m ey l
  KFK24130.1 106 TTNIEDRKTGKIIGRKQTLTYTrsddnpkRQKREDGSsvivpgsESSWIMTEYML 160
                 865555558999**********77766652233332234444449********87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.5387177IPR003441NAC domain
SuperFamilySSF1019412.75E-238175IPR003441NAC domain
PfamPF023656.6E-149159IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MSDYYEEDEG FHFEPYEDEL IKDYLIPELK GESCYDFIVH KNVYDMEPWL LDHNMDPFFQ  60
KNEWYYFVTR VQVSEKKIGY GKQAKRKIAG DNNDGIERGN WKANATTNIE DRKTGKIIGR  120
KQTLTYTRSD DNPKRQKRED GSSVIVPGSE SSWIMTEYML PEGENFQELV LCKIKIIRSK  180
KNHDHEAFTS TSTSIYHHHE TVLASSSSSD QQQINIDHEI NKSNNREASS SVTLKEGAKG  240
NDLGH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK24130.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013608285.17e-72PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A087G2M80.0A0A087G2M8_ARAAL; Uncharacterized protein (Fragment)
STRINGA0A087G2M80.0(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM26071358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18300.14e-16NAC domain containing protein 88