PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK22783.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family NAC
Protein Properties Length: 280aa    MW: 30892.8 Da    PI: 4.8785
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK22783.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.63.4e-0896179128
         NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                 ++g W+a  ++ +++++ +g+ +g k+tL++    k+++++g++++W+m+ey l
  KFK22783.1   9 HRGNWRANATT-DIKDRkTGKIIGKKQTLTYTrrnKKEKREGSESSWIMKEYML 61 
                 6799**98775.5555548999**********766678999***********87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.942178IPR003441NAC domain
SuperFamilySSF1019414.05E-9976IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
METDDDGIHR GNWRANATTD IKDRKTGKII GKKQTLTYTR RNKKEKREGS ESSWIMKEYM  60
LPEGENFQEL VLCKININKS KKNHDHEAST STSTSTSTST STYHHHESVL ASSSSSDQQP  120
INIDHEINKS NNGEACSSGT LKAGGEGKAP LGHGSSVPTG SEEGDWIQYF DLPVDEGLSG  180
LIAAGEGNAP LQINEHVSAL DTSSEKQPIN ETHREESENL GRKSTQKVLK ELEESLLGVN  240
EPGSRVEEDK EELLIYNKEE LEDLFNQFAA LCPTKTSQTC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK22783.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A087FYT10.0A0A087FYT1_ARAAL; Uncharacterized protein
STRINGA0A087FYT10.0(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM26071358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G60280.14e-06NAC domain containing protein 23