PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Phylogenetic Tree for
Oryza sativa subsp. japonica
MIKC_MADS Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- LOC_Os05g11380.1/35-84  (1)
      |                                                                               
      |------------------------------------------------------------------- LOC_Os01g10504.1/49-98  (10)
      |                                                                               
      |------------------------------------------------------------------- LOC_Os05g11414.1/51-101 (24)
      |                                                                               
      |      /------------------------------------------------------------ LOC_Os12g10540.1/9-59   (2)
      |      |                                                                        
      |      |                                                    /------- LOC_Os02g52340.1/9-59   (3)
      |      |                                              /--99-+                   
      |      |                                              |     \------- LOC_Os06g11330.1/10-59  (4)
      |      |                                       /--100-+                         
      |      |                                       |      \------------- LOC_Os03g08754.1/29-78  (30)
      |      |                                /--59--+                                
      |      |                                |      \-------------------- LOC_Os08g33488.1/9-59   (19)
      |      |                                |                                       
      |      |                                |                   /------- LOC_Os05g34940.1/9-59   (7)
      +      |                                |             /-100-+                   
      |      |                                |             |     \------- LOC_Os01g66030.1/9-59   (35)
      |      |                                |             |                         
      |      |                                |             |     /------- LOC_Os02g07430.1/9-59   (9)
      |      |                                |             |     |                   
      |      |                                |      /--65--+--96-+------- LOC_Os06g45650.1/9-59   (26)
      |      |                                |      |      |     |                   
      |      |                                |      |      |     \------- LOC_Os04g52410.2/9-59   (27)
      |      |                                |      |      |                         
      |      |                          /--99-+      |      \------------- LOC_Os06g49840.1/9-59   (14)
      |      |                          |     |--76--+                                
      |      |                          |     |      |            /------- LOC_Os08g02070.1/10-56  (17)
      |      |                          |     |      |-----93-----+                   
      |      |                          |     |      |            \------- LOC_Os12g10520.1/10-58  (34)
      |      |                          |     |      |                                
      |      |                          |     |      \-------------------- LOC_Os01g52680.1/9-58   (36)
      |      |                          |     |                                       
      \--82--+                          |     |--------------------------- LOC_Os04g23910.1/9-59   (15)
             |                          |     |                                       
             |            /------64-----+     |--------------------------- LOC_Os02g36924.1/10-59  (28)
             |            |             |     |                                       
             |            |             |     \--------------------------- LOC_Os02g49840.1/10-59  (32)
             |            |             |                                             
             |            |             |                   /------------- LOC_Os06g01890.1/19-68  (8)
             |            |             |                   |                         
             |            |             |                   |     /------- LOC_Os02g01355.1/50-99  (13)
             |            |             |            /--86--+--60-+                   
             |            |             |            |      |     \------- LOC_Os02g01365.1/50-99  (18)
             |            |             |            |      |                         
             |            |             \-----93-----+      \------------- LOC_Os08g41960.1/17-66  (23)
             |            |                          |                                
             |            |                          \-------------------- LOC_Os10g39130.1/9-59   (22)
             |            |                                                           
             |     /--97--+                                       /------- LOC_Os02g45770.1/9-58   (5)
             |     |      |                   /---------86--------+                   
             |     |      |                   |                   \------- LOC_Os04g49150.1/14-63  (29)
             |     |      |                   |                                       
             |     |      |                   |             /------------- LOC_Os03g54160.1/9-59   (12)
             |     |      |             /--54-+             |                         
             |     |      |             |     |      /--99--+     /------- LOC_Os12g31748.2/10-59  (31)
             |     |      |             |     |      |      \--95-+                   
             |     |      |             |     \--100-+            \------- LOC_Os07g01820.1/9-59   (37)
             |     |      |      /--81--+            |                                
             |     |      |      |      |            \-------------------- LOC_Os07g41370.1/10-59  (16)
             \--95-+      |      |      |                                             
                   |      |      |      |                         /------- LOC_Os09g32948.1/9-59   (20)
                   |      |      |      \------------99-----------+                   
                   |      \--91--+                                \------- LOC_Os08g41950.1/35-85  (25)
                   |             |                                                    
                   |             |                          /------------- LOC_Os03g54170.1/10-59  (11)
                   |             |                          |                         
                   |             \------------62------------+     /------- LOC_Os03g11614.1/9-59   (21)
                   |                                        \--84-+                   
                   |                                              \------- LOC_Os06g06750.1/9-59   (33)
                   |                                                                  
                   \------------------------------------------------------ LOC_Os01g66290.1/9-59   (6)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- LOC_Os03g08754.1 (1)
      |                                                                               
      |                                                           /------- LOC_Os12g10520.1 (2)
      |                                                   /--100--+                   
      |                                                   |       \------- LOC_Os08g02070.1 (11)
      |                                            /--100-+                           
      |                                            |      \--------------- LOC_Os01g52680.1 (17)
      |                                            |                                  
      |                                            |              /------- LOC_Os02g07430.1 (15)
      |                                            |      /---82--+                   
      |                                            |      |       \------- LOC_Os04g52410.2 (20)
      |              /--------------85-------------+--100-+                           
      |              |                             |      \--------------- LOC_Os06g45650.1 (35)
      |              |                             |                                  
      |              |                             |              /------- LOC_Os01g66030.1 (16)
      |              |                             |      /--100--+                   
      |              |                             |      |       \------- LOC_Os05g34940.1 (18)
      |              |                             \--85--+                           
      |              |                                    \--------------- LOC_Os06g49840.1 (36)
      |              |                                                                
      |              |                                            /------- LOC_Os12g31748.2 (3)
      |              |                                    /---99--+                   
      |              |                                    |       \------- LOC_Os07g41370.1 (24)
      |              |              /---------100---------+                           
      |              |              |                     |       /------- LOC_Os07g01820.1 (12)
      |              |              |                     \--100--+                   
      |      /---99--+              |                             \------- LOC_Os03g54160.1 (30)
      |      |       |              |                                                 
      |      |       |      /--100--+                             /------- LOC_Os02g45770.1 (4)
      |      |       |      |       |      /----------100---------+                   
      |      |       |      |       |      |                      \------- LOC_Os04g49150.1 (27)
      |      |       |      |       |      |                                          
      |      |       |      |       |      |                      /------- LOC_Os09g32948.1 (6)
      |      |       |      |       \--96--+       /------100-----+                   
      |      |       |      |              |       |              \------- LOC_Os08g41950.1 (25)
      |      |       |      |              |       |                                  
      +      |       |      |              \---99--+              /------- LOC_Os03g11614.1 (10)
      |      |       |      |                      |      /--100--+                   
      |      |       |      |                      |      |       \------- LOC_Os06g06750.1 (19)
      |      |       |      |                      \--100-+                           
      |      |       |      |                             \--------------- LOC_Os03g54170.1 (32)
      |      |       \--81--+                                                         
      |      |              |                                     /------- LOC_Os02g01365.1 (8)
      |      |              |                             /--100--+                   
      |      |              |                             |       \------- LOC_Os02g01355.1 (29)
      |      |              |                      /--99--+                           
      |--100-+              |                      |      \--------------- LOC_Os06g01890.1 (22)
      |      |              |              /---97--+                                  
      |      |              |              |       \---------------------- LOC_Os10g39130.1 (21)
      |      |              |       /--84--+                                          
      |      |              |       |      \------------------------------ LOC_Os08g41960.1 (26)
      |      |              |       |                                                 
      |      |              |       |              /---------------------- LOC_Os01g66290.1 (13)
      |      |              |       |              |                                  
      |      |              \---61--+              |              /------- LOC_Os05g11414.1 (14)
      |      |                      |      /---93--+      /--100--+                   
      |      |                      |      |       |      |       \------- LOC_Os05g11380.1 (34)
      |      |                      |      |       \--100-+                           
      |      |                      \--100-+              \--------------- LOC_Os01g10504.1 (31)
      |      |                             |                                          
      |      |                             \------------------------------ LOC_Os12g10540.1 (33)
      |      |                                                                        
      |      |                                            /--------------- LOC_Os04g23910.1 (9)
      |      |                                            |                           
      |      |                                     /--96--+       /------- LOC_Os02g49840.1 (28)
      |      |                                     |      \---88--+                   
      |      \-----------------100-----------------+              \------- LOC_Os02g36924.1 (37)
      |                                            |                                  
      |                                            \---------------------- LOC_Os08g33488.1 (23)
      |                                                                               
      |                                                           /------- LOC_Os06g11330.1 (5)
      \----------------------------100----------------------------+                   
                                                                  \------- LOC_Os02g52340.1 (7)