PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Phylogenetic Tree for
Oryza sativa subsp. japonica
M-type_MADS Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- LOC_Os11g12360.1/8-42    (1)
      |                                                                               
      |------------------------------------------------------------------- LOC_Os03g37670.1/2-31    (3)
      |                                                                               
      |------------------------------------------------------------------- LOC_Os01g18420.1/12-50   (4)
      |                                                                               
      |------------------------------------------------------------------- LOC_Os03g38610.1/10-50   (18)
      |                                                                               
      |------------------------------------------------------------------- LOC_Os01g18440.1/10-50   (22)
      |                                                                               
      |                                                     /------------- LOC_Os01g23750.1/4-27    (8)
      |                                       /-----100-----+                         
      |                                       |             \------------- LOC_Os01g23770.1/16-45   (30)
      |                          /-----51-----+                                       
      |                          |            \--------------------------- LOC_Os01g23780.1/6-39    (27)
      |            /------96-----+                                                    
      |            |             \---------------------------------------- LOC_Os01g23760.1/13-50   (9)
      |-----99-----+                                                                  
      |            \------------------------------------------------------ LOC_Os01g68560.1/11-52   (23)
      |                                                                               
      |                                       /--------------------------- LOC_Os11g43740.1/10-53   (2)
      |                                       |                                       
      |                          /-----97-----+             /------------- LOC_Os06g11970.1/9-58    (13)
      |                          |            \------83-----+                         
      |                          |                          \------------- LOC_Os08g38590.1/9-58    (31)
      |                          |                                                    
      |                          |                          /------------- LOC_Os04g31804.1/11-53   (5)
      |                          |            /------61-----+                         
      |            /------94-----+            |             \------------- LOC_Os06g23950.1/9-59    (14)
      |            |             |-----94-----+                                       
      |            |             |            \--------------------------- LOC_Os04g38770.1/10-59   (15)
      |            |             |                                                    
      +            |             |---------------------------------------- LOC_Os03g03100.1/9-59    (17)
      |            |             |                                                    
      |            |             \---------------------------------------- LOC_Os01g69850.1/66-115  (21)
      |            |                                                                  
      |            |                                        /------------- LOC_Os12g21880.1/13-60   (6)
      |            |                          /-----100-----+                         
      |            |                          |             \------------- LOC_Os12g21850.1/19-66   (26)
      |            |             /-----74-----+                                       
      |            |             |            |             /------------- LOC_Os07g04170.1/145-180 (28)
      |            |             |            \-----100-----+                         
      |-----99-----+------93-----+                          \------------- LOC_Os01g11510.1/13-49   (33)
      |            |             |                                                    
      |            |             |                          /------------- LOC_Os06g30830.1/20-66   (19)
      |            |             \------------91------------+                         
      |            |                                        \------------- LOC_Os06g30810.1/19-66   (25)
      |            |                                                                  
      |            |                                        /------------- LOC_Os09g02830.1/22-69   (7)
      |            |                          /------82-----+                         
      |            |                          |             \------------- LOC_Os01g74440.1/24-71   (32)
      |            |             /-----80-----+                                       
      |            |             |            \--------------------------- LOC_Os09g02780.1/2-42    (11)
      |            |             |                                                    
      |            |             |---------------------------------------- LOC_Os02g06860.1/30-74   (10)
      |            \------90-----+                                                    
      |                          |---------------------------------------- LOC_Os06g22760.1/9-57    (12)
      |                          |                                                    
      |                          |                          /------------- LOC_Os03g14850.1/20-57   (20)
      |                          \------------53------------+                         
      |                                                     \------------- LOC_Os05g23780.1/16-64   (29)
      |                                                                               
      |                                                     /------------- LOC_Os04g25870.1/14-38   (16)
      \--------------------------65-------------------------+                         
                                                            \------------- LOC_Os01g67890.1/123-175 (24)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- LOC_Os09g02780.1 (1)
      |                                                                               
      |                                          /------------------------ LOC_Os01g18420.1 (2)
      |                                          |                                    
      |                                          |                 /------ LOC_Os04g25870.1 (7)
      |                                          |           /-100-+                  
      |                                    /-100-+           |     \------ LOC_Os03g38610.1 (31)
      |                                    |     |     /--99-+                        
      |                                    |     |     |     \------------ LOC_Os03g37670.1 (33)
      |                                    |     \--95-+                              
      |                                    |           \------------------ LOC_Os01g18440.1 (12)
      |                             /--70--+                                          
      |                             |      |     /------------------------ LOC_Os01g67890.1 (11)
      |                             |      |     |                                    
      |                             |      |     |           /------------ LOC_Os01g23750.1 (22)
      |                             |      \--76-+           |                        
      |                             |            |     /-100-+     /------ LOC_Os01g23760.1 (27)
      |                       /-100-+            |     |     \--86-+                  
      |                       |     |            \-100-+           \------ LOC_Os01g23770.1 (28)
      |                       |     |                  |                              
      |                       |     |                  \------------------ LOC_Os01g68560.1 (24)
      |                       |     |                                                 
      |                       |     |                              /------ LOC_Os01g23780.1 (9)
      |                       |     \--------------68--------------+                  
      |                       |                                    \------ LOC_Os11g12360.1 (26)
      |                       |                                                       
      |                 /--66-+                                    /------ LOC_Os06g11970.1 (4)
      |                 |     |                              /-100-+                  
      |                 |     |                              |     \------ LOC_Os08g38590.1 (25)
      |                 |     |                  /-----98----+                        
      |                 |     |                  |           \------------ LOC_Os11g43740.1 (10)
      |                 |     |                  |                                    
      +                 |     |                  |                 /------ LOC_Os04g31804.1 (6)
      |                 |     |                  |           /--52-+                  
      |                 |     \--------100-------+           |     \------ LOC_Os04g38770.1 (30)
      |           /-100-+                        |     /--64-+                        
      |           |     |                        |     |     |     /------ LOC_Os01g69850.1 (13)
      |           |     |                        |     |     \--53-+                  
      |           |     |                        \--64-+           \------ LOC_Os06g23950.1 (32)
      |           |     |                              |                              
      |           |     |                              \------------------ LOC_Os03g03100.1 (14)
      |           |     |                                                             
      |     /--51-+     |                                          /------ LOC_Os01g11510.1 (8)
      |     |     |     \--------------------99--------------------+                  
      |     |     |                                                \------ LOC_Os07g04170.1 (21)
      |     |     |                                                                   
      |     |     |                                    /------------------ LOC_Os06g30810.1 (3)
      |     |     |                                    |                              
      |     |     |                                    |           /------ LOC_Os12g21850.1 (5)
      |     |     \-----------------100----------------+     /-100-+                  
      |     |                                          |     |     \------ LOC_Os12g21880.1 (17)
      |-100-+                                          \--64-+                        
      |     |                                                \------------ LOC_Os06g30830.1 (23)
      |     |                                                                         
      |     |                                                      /------ LOC_Os06g22760.1 (16)
      |     |                                                /--58-+                  
      |     |                                                |     \------ LOC_Os03g14850.1 (29)
      |     |-----------------------100----------------------+                        
      |     |                                                \------------ LOC_Os05g23780.1 (18)
      |     |                                                                         
      |     \------------------------------------------------------------- LOC_Os02g06860.1 (20)
      |                                                                               
      |                                                            /------ LOC_Os01g74440.1 (15)
      \-----------------------------95-----------------------------+                  
                                                                   \------ LOC_Os09g02830.1 (19)