PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Phylogenetic Tree for
Oryza sativa subsp. japonica
GRAS Family
Phylogenetic tree for domain ? help Back to Top

      Subtree rooted at node 115:

                                                                    /----- LOC_Os11g04570.1/71-350  (2)
                                                               /-100+                 
                                                               |    \----- LOC_Os12g04370.1/169-476 (43)
                                                          /-51-+                      
                                                          |    \---------- LOC_Os12g04370.1/20-127  (25)
                                                    /--92-+                           
                                                    |     |         /----- LOC_Os11g04590.1/3-434   (41)
                                                    |     \---100---+                 
                                               /-93-+               \----- LOC_Os12g04380.1/3-438   (64)
                                               |    |                                 
                                               |    |               /----- LOC_Os12g04370.1/529-966 (35)
                                               |    \------100------+                 
                                               |                    \----- LOC_Os11g04570.1/406-843 (39)
                                          /-95-+                                      
                                          |    |                    /----- LOC_Os05g31380.1/127-506 (24)
                                          |    |               /-98-+                 
                                          |    |               |    \----- LOC_Os05g31420.1/157-558 (50)
                                          |    \------100------+                      
                                          |                    |    /----- LOC_Os01g71970.1/50-437  (49)
                                          |                    \-100+                 
                                          |                         \----- LOC_Os06g10900.1/29-167  (51)
                                          |                                           
                           /------70------+                         /----- LOC_Os05g49930.1/78-454  (7)
                           |              |                    /-100+                 
                           |              |                    |    \----- LOC_Os01g45860.1/86-449  (52)
                           |              |---------100--------+                      
                           |              |                    \---------- LOC_Os03g49990.1/241-621 (42)
                           |              |                                           
                           |              |                         /----- LOC_Os06g03710.1/217-594 (17)
                           |              |                         |                 
                           |              |                         |----- LOC_Os07g16330.1/170-224 (18)
                           |              \------------98-----------+                 
                           |                                        |----- LOC_Os04g37440.1/2-66    (32)
                           |                                        |                 
                           |                                        \----- LOC_Os03g37900.1/38-134  (62)
                           |                                                          
                           |                                        /----- LOC_Os07g39820.1/193-601 (3)
                           |                              /---100---+                 
                           |                              |         \----- LOC_Os03g31880.1/189-602 (53)
                           |                              |                           
                           |              /------100------+         /----- LOC_Os07g40020.1/77-470  (10)
                           |              |               |    /-100+                 
                           |              |               |    |    \----- LOC_Os05g42130.1/37-423  (28)
                           |              |               \-95-+                      
                           |              |                    \---------- LOC_Os03g29480.1/134-520 (21)
                           |              |                                           
                           |              |               /--------------- LOC_Os07g36170.1/202-570 (4)
                           |              |               |                           
                           |    /----61---+               |         /----- LOC_Os10g22430.1/171-540 (19)
                           |    |         |         /-100-+    /-100+                 
                           |    |         |         |     |    |    \----- LOC_Os03g09280.1/167-535 (63)
                           |    |         |         |     \-93-+                      
                           |    |         |    /-100+          \---------- LOC_Os07g39470.1/174-543 (45)
                           |    |         |    |    |                                 
                           |    |         |    |    \--------------------- LOC_Os01g65900.1/184-553 (56)
                           |    |         \-100+                                      
                           |    |              |               /---------- LOC_Os04g49110.1/262-619 (5)
                           |    |              |               |                      
                           |    |              \------100------+    /----- LOC_Os02g45760.1/254-618 (26)
                           |    |                              \-99-+                 
                           |    |                                   \----- LOC_Os02g21685.1/63-116  (60)
                           |    |                                                     
                           |    |                                   /----- LOC_Os11g04400.1/339-541 (8)
                           |    |                              /-55-+                 
                           |    |                              |    \----- LOC_Os12g04200.1/167-546 (20)
                           |    |                         /-98-+                      
                           |    |                         |    \---------- LOC_Os11g04400.1/199-346 (46)
                     /--67-+    |                   /--52-+                           
                     |     |    |                   |     |         /----- LOC_Os11g47910.1/216-585 (22)
                     |     |-55-+                   |     \---100---+                 
                     |     |    |                   |               \----- LOC_Os11g47920.1/214-583 (34)
                     |     |    |                   |                                 
                     |     |    |                   |          /---------- LOC_Os11g47870.1/304-682 (27)
                     |     |    |              /-52-+          |                      
                     |     |    |              |    |----100---+    /----- LOC_Os11g11600.1/3-120   (40)
                     |     |    |              |    |          \-100+                 
                     |     |    |              |    |               \----- LOC_Os11g47890.1/258-633 (59)
                     |     |    |         /-52-+    |                                 
                     |     |    |         |    |    \--------------------- LOC_Os11g47900.1/264-638 (37)
                     |     |    |         |    |                                      
                     |     |    |         |    \-------------------------- LOC_Os12g38490.1/358-730 (55)
                     |     |    |         |                                           
                     |     |    |         |                    /---------- LOC_Os03g48450.1/356-727 (13)
                     |     |    |         |                    |                      
                     |     |    |    /-92-+---------81---------+    /----- LOC_Os03g40080.1/434-663 (58)
                     |     |    |    |    |                    \-66-+                 
                     |     |    |    |    |                         \----- LOC_Os03g40080.1/360-429 (66)
                     |     |    |    |    |                                           
                     |     |    |    |    |------------------------------- LOC_Os04g50060.1/262-634 (23)
                     |     |    \-51-+    |                                           
                     |     |         |    \------------------------------- LOC_Os01g62460.1/444-813 (36)
                /-58-+     |         |                                                
                |    |     |         |                              /----- LOC_Os01g67670.1/72-274  (9)
                |    |     |         \--------------100-------------+                 
                |    |     |                                        \----- LOC_Os01g67650.1/157-531 (44)
                |    |     |                                                          
                |    |     |                                        /----- LOC_Os12g02870.1/293-653 (12)
                |    |     |                                   /-100+                 
                |    |     |                                   |    \----- LOC_Os11g03110.1/284-644 (33)
                |    |     |                              /-100+                      
                |    |     |                              |    \---------- LOC_Os07g38030.1/69-434  (29)
                |    |     |--------------100-------------+                           
                |    |     |                              \--------------- LOC_Os05g40710.1/117-484 (16)
                |    |     |                                                          
                |    |     |                                        /----- LOC_Os02g10360.1/41-420  (14)
           /-100+    |     |-------------------100------------------+                 
           |    |    |     |                                        \----- LOC_Os06g40780.1/276-662 (48)
           |    |    |     |                                                          
           |    |    |     |---------------------------------------------- LOC_Os03g51330.1/209-578 (15)
           |    |    |     |                                                          
           |    |    |     |---------------------------------------------- LOC_Os11g31100.1/401-771 (30)
           |    |    |     |                                                          
           |    |    |     \---------------------------------------------- LOC_Os04g35250.1/86-495  (31)
           |    |    |                                                                
      --97-+    |    \---------------------------------------------------- LOC_Os03g15680.1/132-525 (54)
           |    |                                                                     
           |    |                                                   /----- LOC_Os12g06540.1/308-459 (6)
           |    |                                                   |                 
           |    \-------------------------69------------------------+----- LOC_Os12g06540.1/175-306 (38)
           |                                                        |                 
           |                                                        \----- LOC_Os11g06180.1/48-391  (61)
           |                                                                          
           \-------------------------------------------------------------- LOC_Os06g01620.1/126-479 (11)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- LOC_Os04g46860.1/354-710 (1)
      |                                                                               
      |                                 /--------------------------------- LOC_Os02g44370.1/357-714 (47)
      |---------------100---------------+                                             
      +                                 \--------------------------------- LOC_Os02g44360.1/351-708 (65)
      |                                                                               
      |                                 /--------------------------------- (115)
      \---------------100---------------+                                             
                                        \--------------------------------- LOC_Os10g40390.1/36-369  (57)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- LOC_Os12g38490.1 (1)
      |                                                                               
      |                                                           /------- LOC_Os07g39470.1 (2)
      |                                                   /---52--+                   
      |                                                   |       \------- LOC_Os07g36170.1 (52)
      |                                            /--100-+                           
      |                                            |      |       /------- LOC_Os03g09280.1 (9)
      |                                            |      \--100--+                   
      |                                    /---66--+              \------- LOC_Os10g22430.1 (28)
      |                                    |       |                                  
      |                                    |       \---------------------- LOC_Os01g65900.1 (38)
      |                             /--100-+                                          
      |                             |      |              /--------------- LOC_Os04g49110.1 (10)
      |                             |      |              |                           
      |                             |      \------100-----+       /------- LOC_Os02g45760.1 (12)
      |                             |                     \--100--+                   
      |                             |                             \------- LOC_Os02g21685.1 (48)
      |              /------55------+                                                 
      |              |              |                             /------- LOC_Os07g39820.1 (11)
      |              |              |              /------100-----+                   
      |              |              |              |              \------- LOC_Os03g31880.1 (33)
      |              |              |              |                                  
      |              |              \------100-----+              /------- LOC_Os07g40020.1 (23)
      |              |                             |      /--100--+                   
      |              |                             |      |       \------- LOC_Os05g42130.1 (42)
      |              |                             \--98--+                           
      |              |                                    \--------------- LOC_Os03g29480.1 (41)
      |              |                                                                
      |              |                                            /------- LOC_Os05g31380.1 (3)
      |              |                     /----------99----------+                   
      |              |                     |                      \------- LOC_Os05g31420.1 (50)
      |              |                     |                                          
      |              |                     |                      /------- LOC_Os01g71970.1 (14)
      |              |              /--100-+       /------100-----+                   
      |              |              |      |       |              \------- LOC_Os06g10900.1 (60)
      |              |              |      |       |                                  
      |              |              |      \---56--+              /------- LOC_Os11g04570.1 (17)
      |              |              |              |      /--100--+                   
      |              |              |              |      |       \------- LOC_Os12g04370.1 (30)
      |              |              |              \--100-+                           
      |              |              |                     |       /------- LOC_Os12g04380.1 (26)
      |              |      /---53--+                     \--100--+                   
      |      /---97--+      |       |                             \------- LOC_Os11g04590.1 (40)
      |      |       |      |       |                                                 
      |      |       |      |       |                             /------- LOC_Os11g03110.1 (13)
      |      |       |      |       |                     /--100--+                   
      |      |       |      |       |                     |       \------- LOC_Os12g02870.1 (21)
      |      |       |      |       |              /--100-+                           
      |      |       |      |       |              |      \--------------- LOC_Os07g38030.1 (27)
      |      |       |      |       \------100-----+                                  
      |      |       |      |                      \---------------------- LOC_Os05g40710.1 (51)
      |      |       |      |                                                         
      |      |       |      |                                     /------- LOC_Os04g35250.1 (4)
      |      |       |      |------------------83-----------------+                   
      |      |       |      |                                     \------- LOC_Os04g37440.1 (5)
      |      |       |      |                                                         
      +      |       |      |                                     /------- LOC_Os01g45860.1 (6)
      |      |       |      |                             /--100--+                   
      |      |       |      |                             |       \------- LOC_Os05g49930.1 (32)
      |      |       |      |                      /--100-+                           
      |      |       |      |                      |      \--------------- LOC_Os03g49990.1 (15)
      |      |       |      |----------70----------+                                  
      |      |       |      |                      \---------------------- LOC_Os11g31100.1 (31)
      |      |       |      |                                                         
      |      |       |      |                             /--------------- LOC_Os03g15680.1 (7)
      |      |       |      |                             |                           
      |      |       |      |       /----------75---------+       /------- LOC_Os12g06540.1 (29)
      |      |       \--56--+       |                     \--100--+                   
      |      |              |       |                             \------- LOC_Os11g06180.1 (58)
      |      |              |       |                                                 
      |      |              |       |                     /--------------- LOC_Os04g46860.1 (34)
      |--78--+              |---54--+                     |                           
      |      |              |       |              /--100-+       /------- LOC_Os02g44360.1 (36)
      |      |              |       |              |      \--100--+                   
      |      |              |       |      /---51--+              \------- LOC_Os02g44370.1 (43)
      |      |              |       |      |       |                                  
      |      |              |       \--100-+       \---------------------- LOC_Os10g40390.1 (55)
      |      |              |              |                                          
      |      |              |              \------------------------------ LOC_Os06g01620.1 (45)
      |      |              |                                                         
      |      |              |                                     /------- LOC_Os03g37900.1 (8)
      |      |              |                             /---68--+                   
      |      |              |                             |       \------- LOC_Os07g16330.1 (59)
      |      |              |--------------69-------------+                           
      |      |              |                             \--------------- LOC_Os06g03710.1 (19)
      |      |              |                                                         
      |      |              |                                     /------- LOC_Os06g40780.1 (16)
      |      |              |                             /--100--+                   
      |      |              |                             |       \------- LOC_Os02g10360.1 (47)
      |      |              |-------------100-------------+                           
      |      |              |                             \--------------- LOC_Os03g51330.1 (24)
      |      |              |                                                         
      |      |              |                                     /------- LOC_Os01g67670.1 (25)
      |      |              \-----------------100-----------------+                   
      |      |                                                    \------- LOC_Os01g67650.1 (39)
      |      |                                                                        
      |      |                                            /--------------- LOC_Os01g62460.1 (44)
      |      |                                            |                           
      |      |                                     /--97--+       /------- LOC_Os03g40080.1 (49)
      |      |                                     |      \--100--+                   
      |      \------------------95-----------------+              \------- LOC_Os03g48450.1 (56)
      |                                            |                                  
      |                                            \---------------------- LOC_Os04g50060.1 (53)
      |                                                                               
      |                                                           /------- LOC_Os11g04400.1 (18)
      |                                                   /--100--+                   
      |                                                   |       \------- LOC_Os12g04200.1 (37)
      |                                    /------86------+                           
      |                                    |              |       /------- LOC_Os11g47910.1 (20)
      |                                    |              \---99--+                   
      |                                    |                      \------- LOC_Os11g47920.1 (35)
      |                                    |                                          
      \-----------------78-----------------+                      /------- LOC_Os11g47890.1 (22)
                                           |              /---99--+                   
                                           |              |       \------- LOC_Os11g11600.1 (57)
                                           |       /--99--+                           
                                           |       |      \--------------- LOC_Os11g47870.1 (46)
                                           \--100--+                                  
                                                   \---------------------- LOC_Os11g47900.1 (54)