PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Phylogenetic Tree for
Castanea mollissima
AP2 Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- maker-scaffold00228-snap-gene-0.34-mRNA-1/157-206            (1)
      |                                                                               
      |                                                 /----------------- maker-scaffold01040-augustus-gene-0.27-mRNA-1/266-317        (2)
      |                                                 |                             
      |                                                 |----------------- maker-scaffold06601-snap-gene-0.7-mRNA-1/424-473             (3)
      |                                                 |                             
      |                                                 |----------------- maker-scaffold01109-augustus-gene-0.18-mRNA-1/398-449        (5)
      |                                                 |                             
      |                                         /--100--+----------------- augustus_masked-scaffold07489-abinit-gene-0.2-mRNA-1/416-465 (6)
      |                                         |       |                             
      |                                         |       |----------------- maker-scaffold06867-augustus-gene-0.3-mRNA-1/343-392         (16)
      |                                         |       |                             
      |                                         |       |        /-------- maker-scaffold10113-augustus-gene-0.5-mRNA-1/325-376         (18)
      |                                 /--100--+       \---78---+                    
      |                                 |       |                \-------- augustus_masked-scaffold09652-abinit-gene-0.0-mRNA-1/266-315 (30)
      |                                 |       |                                     
      |                                 |       |                /-------- maker-scaffold01061-augustus-gene-0.28-mRNA-1/130-182        (10)
      |                                 |       \-------80-------+                    
      |                                 |                        \-------- maker-scaffold03483-augustus-gene-0.17-mRNA-1/114-158        (13)
      |                        /---89---+                                             
      |                        |        |               /----------------- augustus_masked-scaffold05207-abinit-gene-0.0-mRNA-1/258-308 (15)
      |                        |        |               |                             
      |                        |        |       /---83--+        /-------- maker-scaffold12356-snap-gene-0.3-mRNA-1/270-320             (17)
      |                        |        |       |       \---61---+                    
      |       /-------75-------+        \--100--+                \-------- maker-scaffold07767-augustus-gene-0.5-mRNA-1/266-316         (21)
      |       |                |                |                                     
      |       |                |                \------------------------- maker-scaffold00228-snap-gene-0.34-mRNA-1/249-299            (20)
      |       |                |                                                      
      |       |                |                                 /-------- maker-scaffold04275-augustus-gene-0.10-mRNA-1/227-277        (8)
      +       |                \---------------100---------------+                    
      |       |                                                  \-------- maker-scaffold04275-augustus-gene-0.10-mRNA-1/47-97          (28)
      |       |                                                                       
      |       |                         /--------------------------------- maker-scaffold07957-augustus-gene-0.12-mRNA-1/48-89          (4)
      |       |                         |                                             
      |       |                         |               /----------------- maker-scaffold02994-augustus-gene-0.11-mRNA-1/70-126         (11)
      |       |                /---86---+               |                             
      |--100--+                |        |       /---73--+        /-------- maker-scaffold01507-snap-gene-0.35-mRNA-1/50-107             (25)
      |       |                |        |       |       \---79---+                    
      |       |                |        \---63--+                \-------- maker-scaffold01061-augustus-gene-0.28-mRNA-1/31-87          (31)
      |       |                |                |                                     
      |       |                |                \------------------------- maker-scaffold03483-augustus-gene-0.17-mRNA-1/18-74          (22)
      |       |                |                                                      
      |       |        /---60--+                        /----------------- maker-scaffold01040-augustus-gene-0.27-mRNA-1/167-223        (7)
      |       |        |       |                        |                             
      |       |        |       |                /---96--+        /-------- maker-scaffold06867-augustus-gene-0.3-mRNA-1/242-298         (23)
      |       |        |       |                |       \---64---+                    
      |       |        |       |        /---64--+                \-------- maker-scaffold01109-augustus-gene-0.18-mRNA-1/299-355        (26)
      |       |        |       |        |       |                                     
      |       \---100--+       |        |       \------------------------- maker-scaffold10113-augustus-gene-0.5-mRNA-1/226-282         (19)
      |                |       \---72---+                                             
      |                |                |                        /-------- maker-scaffold06601-snap-gene-0.7-mRNA-1/323-379             (12)
      |                |                \-----------100----------+                    
      |                |                                         \-------- augustus_masked-scaffold07489-abinit-gene-0.2-mRNA-1/315-371 (14)
      |                |                                                              
      |                \-------------------------------------------------- augustus_masked-scaffold09652-abinit-gene-0.0-mRNA-1/162-221 (27)
      |                                                                               
      |                                                 /----------------- maker-scaffold07767-augustus-gene-0.5-mRNA-1/162-223         (9)
      |                                                 |                             
      \------------------------60-----------------------+        /-------- maker-scaffold12356-snap-gene-0.3-mRNA-1/178-227             (24)
                                                        \---66---+                    
                                                                 \-------- augustus_masked-scaffold05207-abinit-gene-0.0-mRNA-1/166-215 (29)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- maker-scaffold01109-augustus-gene-0.18-mRNA-1        (1)
      |                                                                               
      |                                                          /-------- maker-scaffold10113-augustus-gene-0.5-mRNA-1         (12)
      |----------------------------89----------------------------+                    
      |                                                          \-------- augustus_masked-scaffold09652-abinit-gene-0.0-mRNA-1 (15)
      |                                                                               
      |                                         /------------------------- maker-scaffold03483-augustus-gene-0.17-mRNA-1        (2)
      |                                         |                                     
      |                                 /---63--+       /----------------- maker-scaffold01061-augustus-gene-0.28-mRNA-1        (8)
      |                                 |       |       |                             
      |                                 |       \---74--+        /-------- maker-scaffold07957-augustus-gene-0.12-mRNA-1        (11)
      |                        /---94---+               \---100--+                    
      |                        |        |                        \-------- maker-scaffold01507-snap-gene-0.35-mRNA-1            (14)
      |                        |        |                                             
      +                        |        \--------------------------------- maker-scaffold02994-augustus-gene-0.11-mRNA-1        (16)
      |                /---99--+                                                      
      |                |       |                /------------------------- maker-scaffold07767-augustus-gene-0.5-mRNA-1         (3)
      |                |       |                |                                     
      |                |       |                |                /-------- augustus_masked-scaffold05207-abinit-gene-0.0-mRNA-1 (4)
      |                |       \-------100------+       /---100--+                    
      |                |                        |       |        \-------- maker-scaffold00228-snap-gene-0.34-mRNA-1            (5)
      |                |                        \--100--+                             
      |       /---91---+                                \----------------- maker-scaffold12356-snap-gene-0.3-mRNA-1             (17)
      |       |        |                                                              
      |       |        |                                         /-------- augustus_masked-scaffold07489-abinit-gene-0.2-mRNA-1 (6)
      |       |        |                                /---100--+                    
      |       |        |                                |        \-------- maker-scaffold06601-snap-gene-0.7-mRNA-1             (10)
      \---72--+        |                        /---69--+                             
              |        |                        |       \----------------- maker-scaffold06867-augustus-gene-0.3-mRNA-1         (7)
              |        \-----------66-----------+                                     
              |                                 \------------------------- maker-scaffold04275-augustus-gene-0.10-mRNA-1        (9)
              |                                                                       
              \----------------------------------------------------------- maker-scaffold01040-augustus-gene-0.27-mRNA-1        (13)