PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Phylogenetic Tree for
Brassica oleracea
M-type_MADS Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- XP_013600953.1/10-53   (1)
      |                                                                               
      |------------------------------------------------------------------- XP_013594279.1/11-57   (55)
      |                                                                               
      |------------------------------------------------------------------- XP_013590890.1/9-59    (64)
      |                                                                               
      |                                                      /------------ XP_013615131.1/12-60   (2)
      |                                                      |                        
      |                                                /-100-+     /------ XP_013608519.1/12-60   (30)
      |                                                |     |     |                  
      |                                                |     \--62-+------ XP_013608520.1/12-60   (48)
      |                                                |           |                  
      |                                          /-100-+           \------ XP_013608518.1/12-60   (49)
      |                                          |     |                              
      |                                          |     |           /------ XP_013608508.1/11-60   (3)
      |                       /--------89--------+     \----100----+                  
      |                       |                  |                 \------ XP_013608509.1/11-60   (45)
      |                       |                  |                                    
      |                       |                  \------------------------ XP_013619814.1/10-58   (21)
      |                       |                                                       
      |                       |                                    /------ XP_013588208.1/21-54   (10)
      |                       |                  /-------100-------+                  
      |                       |                  |                 \------ XP_013589556.1/22-60   (52)
      |                       |                  |                                    
      |                       |                  |                 /------ XP_013591122.1/23-65   (17)
      |                 /--95-+                  |                 |                  
      |                 |     |     /-----67-----+           /--58-+------ XP_013592109.1/23-65   (20)
      |                 |     |     |            |           |     |                  
      |                 |     |     |            |     /--76-+     \------ XP_013615815.1/23-65   (50)
      |                 |     |     |            |     |     |                        
      |                 |     |     |            \--95-+     \------------ XP_013591162.1/29-65   (71)
      |                 |     |     |                  |                              
      |                 |     |     |                  \------------------ XP_013605329.1/29-70   (31)
      |                 |     |     |                                                 
      |                 |     |     |                  /------------------ XP_013633153.1/9-57    (15)
      |                 |     \-100-+                  |                              
      |                 |           |                  |           /------ XP_013633155.1/16-64   (26)
      |                 |           |            /-100-+     /--99-+                  
      |                 |           |            |     |     |     \------ XP_013633151.1/17-65   (51)
      |                 |           |            |     \--76-+                        
      |                 |           |      /--99-+           \------------ XP_013633147.1/18-66   (28)
      |                 |           |      |     |                                    
      |                 |           |      |     \------------------------ XP_013613614.1/6-55    (65)
      |                 |           |      |                                          
      |                 |           \--100-+                       /------ XP_013583243.1/23-69   (27)
      |                 |                  |-----------82----------+                  
      |                 |                  |                       \------ XP_013592561.1/23-68   (62)
      |                 |                  |                                          
      |                 |                  \------------------------------ XP_013624242.1/23-60   (36)
      |           /--58-+                                                             
      |           |     |                                          /------ XP_013619903.1/10-50   (6)
      |           |     |                        /--------99-------+                  
      |           |     |                        |                 \------ XP_013597142.1/43-87   (66)
      |           |     |                        |                                    
      |           |     |                        |                 /------ XP_013617893.1/18-65   (11)
      |           |     |                        |           /-100-+                  
      |           |     |                        |           |     \------ XP_013617909.1/10-57   (39)
      |           |     |                        |     /--99-+                        
      |           |     |                        |     |     \------------ XP_013617898.1/9-52    (72)
      |           |     |                        |-100-+                              
      |           |     |                        |     \------------------ XP_013619615.1/10-52   (41)
      |           |     |                        |                                    
      |           |     |                        |                 /------ XP_013584191.1/11-50   (14)
      |           |     |                        |           /--99-+                  
      |           |     |                        |           |     \------ XP_013596119.1/11-50   (75)
      |           |     |                  /-100-+-----86----+                        
      |           |     |                  |     |           \------------ XP_013596905.1/11-48   (19)
      |     /--76-+     |                  |     |                                    
      |     |     |     |                  |     |                 /------ XP_013630382.1/11-49   (16)
      |     |     |     |                  |     |-------100-------+                  
      |     |     |     |                  |     |                 \------ XP_013624445.1/11-51   (56)
      |     |     |     |                  |     |                                    
      |     |     |     |                  |     |------------------------ XP_013584728.1/11-50   (22)
      |     |     |     \--------66--------+     |                                    
      |     |     |                        |     |------------------------ XP_013619870.1/1-22    (53)
      |     |     |                        |     |                                    
      |     |     |                        |     |------------------------ XP_013584995.1/10-50   (70)
      |     |     |                        |     |                                    
      +     |     |                        |     \------------------------ XP_013610078.1/10-51   (77)
      |     |     |                        |                                          
      |     |     |                        |                       /------ XP_013623871.1/10-51   (7)
      |     |     |                        \-----------99----------+                  
      |     |     |                                                \------ XP_013608279.1/11-53   (37)
      |     |     |                                                                   
      |     |     \------------------------------------------------------- XP_013585077.1/10-50   (69)
      |     |                                                                         
      |     |                                                      /------ XP_013632661.1/17-62   (5)
      |     |                                                /--99-+                  
      |     |                                                |     \------ XP_013639809.1/17-62   (24)
      |     |                                          /--86-+                        
      |     |                                          |     |     /------ XP_013635683.1/16-62   (18)
      |     |                                          |     \-100-+                  
      |     |                              /-----93----+           \------ XP_013635570.1/17-62   (43)
      |     |                              |           |                              
      |     |                              |           \------------------ XP_013610714.1/16-62   (73)
      |     |                              |                                          
      |     |                              |                 /------------ XP_013635263.1/2-51    (8)
      |     |                              |                 |                        
      |     |                              |           /-100-+     /------ XP_013610790.1/13-61   (47)
      |     |                              |           |     \--90-+                  
      |     |                              |     /-100-+           \------ XP_013638752.1/19-62   (57)
      |     |                              |     |     |                              
      |--59-+                              |     |     \------------------ XP_013639481.1/20-63   (46)
      |     |                              |--74-+                                    
      |     |                              |     |                 /------ XP_013623370.1/11-57   (29)
      |     |                              |     \--------99-------+                  
      |     |                              |                       \------ XP_013633368.1/12-57   (33)
      |     |                              |                                          
      |     |                              |     /------------------------ XP_013610889.1/12-49   (9)
      |     |                              |     |                                    
      |     |                              |     |------------------------ XP_013607713.1/11-49   (25)
      |     |                              |     |                                    
      |     |                              |     |                 /------ XP_013588961.1/45-83   (32)
      |     |                       /--63--+     |                 |                  
      |     |                       |      |     |           /--68-+------ XP_013588993.1/23-61   (38)
      |     |                       |      |     |           |     |                  
      |     |                       |      |     |           |     \------ XP_013588958.1/177-216 (40)
      |     |                       |      |-100-+     /--89-+                        
      |     |                       |      |     |     |     |     /------ XP_013594963.1/21-55   (35)
      |     |                       |      |     |     |     \-100-+                  
      |     |                       |      |     |--90-+           \------ XP_013596955.1/19-53   (44)
      |     |                       |      |     |     |                              
      |     |                       |      |     |     \------------------ XP_013601021.1/30-69   (58)
      |     |                       |      |     |                                    
      |     |                       |      |     |                 /------ XP_013608535.1/12-50   (34)
      |     |                       |      |     \--------74-------+                  
      |     |                       |      |                       \------ XP_013617877.1/21-63   (80)
      |     |                 /--89-+      |                                          
      |     |                 |     |      |                       /------ XP_013604104.1/63-105  (13)
      |     |                 |     |      |-----------93----------+                  
      |     |                 |     |      |                       \------ XP_013601822.1/18-59   (59)
      |     |                 |     |      |                                          
      |     |                 |     |      |                       /------ XP_013589514.1/50-98   (42)
      |     |                 |     |      |                       |                  
      |     |                 |     |      \----------100----------+------ XP_013604087.1/51-99   (63)
      |     |                 |     |                              |                  
      |     |                 |     |                              \------ XP_013589663.1/35-83   (74)
      |     \--------51-------+     |                                                 
      |                       |     |                        /------------ XP_013619937.1/18-62   (60)
      |                       |     |                        |                        
      |                       |     \-----------84-----------+     /------ XP_013621272.1/14-61   (76)
      |                       |                              \-100-+                  
      |                       |                                    \------ XP_013619932.1/14-61   (78)
      |                       |                                                       
      |                       |                                    /------ XP_013594287.1/9-57    (54)
      |                       |                              /-100-+                  
      |                       |                              |     \------ XP_013594287.1/57-88   (68)
      |                       \--------------62--------------+                        
      |                                                      |     /------ XP_013614580.1/9-56    (61)
      |                                                      \-100-+                  
      |                                                            \------ XP_013615577.1/9-45    (79)
      |                                                                               
      |                                                            /------ XP_013594068.1/10-53   (4)
      |                                                      /--99-+                  
      |                                                      |     \------ XP_013612000.1/10-53   (67)
      \--------------------------51--------------------------+                        
                                                             |     /------ XP_013603519.1/9-53    (12)
                                                             \--90-+                  
                                                                   \------ XP_013603751.1/9-53    (23)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 147:

                                                                    /----- XP_013588961.1 (2)
                                                               /-96-+                 
                                                               |    \----- XP_013588958.1 (79)
                                                          /-100+                      
                                                          |    \---------- XP_013588993.1 (37)
                                                    /--99-+                           
                                                    |     \--------------- XP_013601021.1 (38)
                                                    |                                 
                                               /-84-+               /----- XP_013594963.1 (33)
                                               |    |          /-100+                 
                                               |    |          |    \----- XP_013596955.1 (77)
                                               |    \----63----+                      
                                          /-88-+               \---------- XP_013608535.1 (78)
                                          |    |                                      
                                          |    |                    /----- XP_013607713.1 (23)
                                     /-100+    \---------100--------+                 
                                     |    |                         \----- XP_013610889.1 (63)
                                     |    |                                           
                                     |    \------------------------------- XP_013617877.1 (76)
                                     |                                                
                                /-60-+                              /----- XP_013589663.1 (25)
                                |    |                         /-100+                 
                                |    |                         |    \----- XP_013589514.1 (67)
                                |    |                    /-100+                      
                                |    |                    |    \---------- XP_013604087.1 (31)
                                |    \---------64---------+                           
                                |                         |         /----- XP_013633368.1 (55)
                                |                         \---100---+                 
                                |                                   \----- XP_013623370.1 (61)
                           /-61-+                                                     
                           |    |                                   /----- XP_013604104.1 (19)
                           |    |         /------------99-----------+                 
                           |    |         |                         \----- XP_013601822.1 (22)
                           |    |         |                                           
                           |    |         |                         /----- XP_013632661.1 (26)
                           |    |         |         /------100------+                 
                           |    |         |         |               \----- XP_013639809.1 (72)
                           |    \----88---+         |                                 
                           |              |         |               /----- XP_013619932.1 (39)
                           |              |    /-65-+          /-100+                 
                           |              |    |    |          |    \----- XP_013621272.1 (73)
                     /--68-+              |    |    |     /-100+                      
                     |     |              |    |    |     |    \---------- XP_013619937.1 (68)
                     |     |              \-100+    \--97-+                           
                     |     |                   |          \--------------- XP_013610714.1 (57)
                     |     |                   |                                      
                     |     |                   |                    /----- XP_013635683.1 (46)
                     |     |                   \---------100--------+                 
                     |     |                                        \----- XP_013635570.1 (58)
                     |     |                                                          
                     |     |                              /--------------- XP_013639481.1 (9)
                     |     |                              |                           
                     |     |                              |         /----- XP_013635263.1 (20)
                     |     \--------------86--------------+    /-75-+                 
                     |                                    |    |    \----- XP_013610790.1 (34)
                     |                                    \-100+                      
                     |                                         \---------- XP_013638752.1 (30)
                     |                                                                
                     |                                         /---------- XP_013584995.1 (3)
                     |                                         |                      
                     |                                    /-99-+    /----- XP_013619870.1 (65)
                     |                                    |    \-100+                 
                     |                                    |         \----- XP_013610078.1 (75)
                     |                              /--61-+                           
                     |                              |     |    /---------- XP_013584728.1 (29)
                     |                              |     |    |                      
                     |                              |     \-100+    /----- XP_013630382.1 (45)
                     |                         /-63-+          \-100+                 
                     |                         |    |               \----- XP_013624445.1 (66)
                     |                         |    |                                 
                     |                         |    |               /----- XP_013596119.1 (18)
                     |                    /-84-+    \------100------+                 
                     |                    |    |                    \----- XP_013584191.1 (36)
                     |                    |    |                                      
                     |                    |    |                    /----- XP_013597142.1 (49)
                     |                    |    \---------100--------+                 
                     |                    |                         \----- XP_013619903.1 (69)
                     |                    |                                           
                     |          /---100---+               /--------------- XP_013619615.1 (4)
                     |          |         |               |                           
                     |          |         |               |         /----- XP_013617909.1 (54)
                     |          |         |         /-100-+    /-100+                 
                     |          |         |         |     |    |    \----- XP_013617893.1 (71)
                     |          |         |         |     \-100+                      
                     |          |         \---100---+          \---------- XP_013617898.1 (64)
                     |          |                   |                                 
                     |          |                   \--------------------- XP_013596905.1 (47)
                     |          |                                                     
                     |          |                                   /----- XP_013623871.1 (5)
                     |          |    /--------------100-------------+                 
                /-57-+          |    |                              \----- XP_013608279.1 (8)
                |    |          |    |                                                
                |    |          |    |                    /--------------- XP_013615815.1 (10)
                |    |          |    |                    |                           
                |    |          |    |                    |         /----- XP_013591122.1 (12)
                |    |          |    |              /-100-+    /-59-+                 
                |    |          |    |              |     |    |    \----- XP_013592109.1 (32)
                |    |          |    |              |     \-85-+                      
                |    |          |    |         /-100+          \---------- XP_013591162.1 (70)
                |    |          |-100+         |    |                                 
                |    |          |    |         |    \--------------------- XP_013605329.1 (17)
                |    |          |    |    /-88-+                                      
                |    |          |    |    |    |                    /----- XP_013589556.1 (51)
                |    |          |    |    |    \---------100--------+                 
                |    |          |    |    |                         \----- XP_013588208.1 (59)
                |    |          |    |    |                                           
                |    |----100---+    |    |                         /----- XP_013583243.1 (14)
                |    |          |    |    |                    /-60-+                 
                |    |          |    \-100+                    |    \----- XP_013592561.1 (74)
                |    |          |         |         /----100---+                      
                |    |          |         |         |          \---------- XP_013624242.1 (35)
                |    |          |         |         |                                 
                |    |          |         |         |               /----- XP_013633153.1 (21)
                |    |          |         |         |          /-52-+                 
                |    |          |         \---100---+          |    \----- XP_013633151.1 (27)
                |    |          |                   |          |                      
                |    |          |                   |     /-100+---------- XP_013633147.1 (42)
                |    |          |                   |     |    |                      
           /-96-+    |          |                   \-100-+    \---------- XP_013633155.1 (50)
           |    |    |          |                         |                           
           |    |    |          |                         \--------------- XP_013613614.1 (53)
           |    |    |          |                                                     
           |    |    |          |----------------------------------------- XP_013585077.1 (6)
           |    |    |          |                                                     
           |    |    |          |                              /---------- XP_013615131.1 (7)
           |    |    |          |                              |                      
           |    |    |          |                         /-100+    /----- XP_013608518.1 (24)
           |    |    |          |                         |    |    |                 
           |    |    |          |                         |    \-65-+----- XP_013608519.1 (43)
           |    |    |          |                         |         |                 
           |    |    |          |                   /-100-+         \----- XP_013608520.1 (44)
           |    |    |          |                   |     |                           
           |    |    |          |                   |     |         /----- XP_013608508.1 (13)
      --99-+    |    |          \--------100--------+     \---100---+                 
           |    |    |                              |               \----- XP_013608509.1 (62)
           |    |    |                              |                                 
           |    |    |                              \--------------------- XP_013619814.1 (28)
           |    |    |                                                                
           |    |    |                                              /----- XP_013590890.1 (48)
           |    |    \----------------------100---------------------+                 
           |    |                                                   \----- XP_013594279.1 (60)
           |    |                                                                     
           |    |                                                   /----- XP_013614580.1 (15)
           |    |                                              /-96-+                 
           |    |                                              |    \----- XP_013615577.1 (40)
           |    \----------------------97----------------------+                      
           |                                                   \---------- XP_013594287.1 (56)
           |                                                                          
           \-------------------------------------------------------------- XP_013600953.1 (52)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- XP_013603519.1 (1)
      |                                                                               
      |------------------------------------------------------------------- XP_013603751.1 (11)
      +                                                                               
      |                     /--------------------------------------------- (147)
      |                     |                                                         
      \---------100---------+                      /---------------------- XP_013612000.1 (16)
                            \----------100---------+                                  
                                                   \---------------------- XP_013594068.1 (41)