PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Zoysia pacifica
HD-ZIP Family
Species TF ID Description
Zpz_sc01200.1.g00030.1.am.mkHD-ZIP family protein
Zpz_sc01533.1.g00110.1.am.mkHD-ZIP family protein
Zpz_sc00102.1.g00020.1.sm.mkhcHD-ZIP family protein
Zpz_sc00934.1.g00110.1.am.mkHD-ZIP family protein
Zpz_sc03424.1.g00030.1.sm.mkhcHD-ZIP family protein
Zpz_sc02078.1.g00020.1.am.mkHD-ZIP family protein
Zpz_sc01888.1.g00090.1.sm.mkhcHD-ZIP family protein
Zpz_sc00235.1.g00210.1.sm.mkhcHD-ZIP family protein
Zpz_sc00259.1.g00250.1.sm.mkhcHD-ZIP family protein
Zpz_sc02894.1.g00080.1.am.mkHD-ZIP family protein
Zpz_sc00246.1.g00060.1.sm.mkhcHD-ZIP family protein
Zpz_sc03220.1.g00040.1.am.mkHD-ZIP family protein
Zpz_sc03112.1.g00080.1.am.mkHD-ZIP family protein
Zpz_sc00236.1.g00360.1.sm.mkHD-ZIP family protein
Zpz_sc02764.1.g00020.1.am.mkHD-ZIP family protein
Zpz_sc02326.1.g00040.1.sm.mkhcHD-ZIP family protein
Zpz_sc00281.1.g00510.1.am.mkHD-ZIP family protein
Zpz_sc03644.1.g00020.1.sm.mkHD-ZIP family protein
Zpz_sc00832.1.g00060.1.am.mkHD-ZIP family protein
Zpz_sc00041.1.g00460.1.sm.mkHD-ZIP family protein
Zpz_sc00090.1.g00750.1.am.mkHD-ZIP family protein
Zpz_sc00431.1.g00130.1.am.mkHD-ZIP family protein
Zpz_sc00234.1.g00410.1.am.mkHD-ZIP family protein
Zpz_sc00060.1.g00710.1.am.mkHD-ZIP family protein
Zpz_sc00782.1.g00330.1.am.mkHD-ZIP family protein
Zpz_sc00223.1.g00430.1.am.mkHD-ZIP family protein
Zpz_sc00782.1.g00310.1.am.mkHD-ZIP family protein
Zpz_sc03106.1.g00020.1.sm.mkhcHD-ZIP family protein
Zpz_sc03981.1.g00010.1.sm.mkhcHD-ZIP family protein
Zpz_sc00030.1.g00510.1.am.mkHD-ZIP family protein
Zpz_sc00433.1.g00340.1.sm.mkHD-ZIP family protein
Zpz_sc01801.1.g00110.1.sm.mkhcHD-ZIP family protein
Zpz_sc01047.1.g00010.1.sm.mkhcHD-ZIP family protein
Zpz_sc00840.1.g00010.1.sm.mkHD-ZIP family protein
Zpz_sc00616.1.g00090.1.am.mkHD-ZIP family protein
Zpz_sc03495.1.g00010.1.am.mkHD-ZIP family protein
Zpz_sc02865.1.g00020.1.am.mkHD-ZIP family protein
Zpz_sc00164.1.g00150.1.am.mkHD-ZIP family protein
Zpz_sc02328.1.g00030.1.am.mkHD-ZIP family protein
Zpz_sc00234.1.g00370.1.sm.mkHD-ZIP family protein
Zpz_sc01465.1.g00080.1.am.mkHD-ZIP family protein
Zpz_sc01322.1.g00170.1.sm.mkhcHD-ZIP family protein
Zpz_sc00658.1.g00070.1.am.mkHD-ZIP family protein
Zpz_sc04267.1.g00020.1.am.mkhcHD-ZIP family protein
Zpz_sc01250.1.g00060.1.sm.mkHD-ZIP family protein
Zpz_sc02204.1.g00080.1.am.mkHD-ZIP family protein
Zpz_sc00772.1.g00130.1.am.mkHD-ZIP family protein
Zpz_sc00084.1.g00470.1.sm.mkHD-ZIP family protein
Zpz_sc02621.1.g00010.1.sm.mkHD-ZIP family protein
Zpz_sc02077.1.g00060.1.am.mkHD-ZIP family protein
Zpz_sc04068.1.g00040.1.sm.mkhcHD-ZIP family protein
Zpz_sc00187.1.g00450.1.sm.mkHD-ZIP family protein
Zpz_sc00018.1.g00390.1.sm.mkhcHD-ZIP family protein
Zpz_sc00194.1.g00100.1.sm.mkhcHD-ZIP family protein
Zpz_sc00381.1.g00040.1.sm.mkhcHD-ZIP family protein
Zpz_sc04592.1.g00020.1.sm.mkhcHD-ZIP family protein
Zpz_sc00563.1.g00180.1.sm.mkhcHD-ZIP family protein
Zpz_sc02091.1.g00010.1.sm.mkhcHD-ZIP family protein
Zpz_sc00221.1.g00200.1.am.mkHD-ZIP family protein
Zpz_sc00518.1.g00230.1.am.mkHD-ZIP family protein
Zpz_sc00452.1.g00080.1.am.mkHD-ZIP family protein
Zpz_sc00735.1.g00230.1.sm.mkhcHD-ZIP family protein
Zpz_sc00057.1.g00080.1.am.mkHD-ZIP family protein
Zpz_sc00676.1.g00120.1.am.mkHD-ZIP family protein
Zpz_sc00499.1.g00150.1.sm.mkHD-ZIP family protein
Zpz_sc03896.1.g00010.1.sm.mkHD-ZIP family protein
Zpz_sc01127.1.g00010.1.sm.mkhcHD-ZIP family protein
Zpz_sc00092.1.g00470.1.am.mkhcHD-ZIP family protein
Zpz_sc00537.1.g00220.1.am.mkhcHD-ZIP family protein
Zpz_sc02325.1.g00030.1.am.mkhcHD-ZIP family protein
Zpz_sc04310.1.g00020.1.sm.mkHD-ZIP family protein
Zpz_sc00080.1.g00460.1.am.mkHD-ZIP family protein
Zpz_sc02498.1.g00040.1.sm.mkHD-ZIP family protein
Zpz_sc04574.1.g00030.1.am.mkHD-ZIP family protein
Zpz_sc00155.1.g00360.1.am.mkhcHD-ZIP family protein
Zpz_sc01996.1.g00040.1.sm.mkhcHD-ZIP family protein
Zpz_sc00018.1.g00360.1.sm.mkhcHD-ZIP family protein
Zpz_sc00278.1.g00310.1.am.mkhcHD-ZIP family protein
HD-ZIP Family Introduction

A homeobox (HB) encodes a protein domain, the homeodomain (HD), which is a conserved 60-amino acid motif present in transcription factors found in all the eukaryotic organisms. This 60-amino acid sequence folds into a characteristic three-helix structure that is able to interact specifically with DNA. Most HDs are able to bind DNA as monomers with high affinity, through interactions made by helix III (the so-called recognition helix) and a disordered N-terminal arm located beyond helix I. The high degree of conservation of this type of domain among diverse proteins from different kingdoms indicates that this structure is crucial to maintain the HD functionality and that the role played by this domain is vital.

Members of the HD-Zip family have a leucine zipper motif (LZ) immediately downstream of the HD. The two motifs are present in transcription factors found in species belonging to other eukaryotic kingdoms, but their association in a single protein is unique to plants. The HD is responsible for the specific binding to DNA, whereas LZ acts as a dimerization motif. HD-Zip proteins bind to DNA as dimers, and the absence of LZ absolutely abolishes their binding ability, which indicates that the relative orientation of the monomers, driven by this motif, is crucial for an efficient recognition of DNA.

Ariel FD, Manavella PA, Dezar CA, Chan RL.
The true story of the HD-Zip family.
Trends Plant Sci, 2007. 12(9): p. 419-26.
PMID: 17698401