PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Zoysia matrella
HD-ZIP Family
Species TF ID Description
Zmw_sc01681.1.g00090.1HD-ZIP family protein
Zmw_sc01733.1.g00140.1HD-ZIP family protein
Zmw_sc06690.1.g00030.1HD-ZIP family protein
Zmw_sc00591.1.g00070.1HD-ZIP family protein
Zmw_sc00136.1.g00310.1HD-ZIP family protein
Zmw_sc01577.1.g00110.1HD-ZIP family protein
Zmw_sc06562.1.g00040.1HD-ZIP family protein
Zmw_sc00950.1.g00170.1HD-ZIP family protein
Zmw_sc02141.1.g00100.1HD-ZIP family protein
Zmw_sc00296.1.g00490.1HD-ZIP family protein
Zmw_sc02739.1.g00150.1HD-ZIP family protein
Zmw_sc00963.1.g00120.1HD-ZIP family protein
Zmw_sc00062.1.g00470.1HD-ZIP family protein
Zmw_sc00508.1.g00220.1HD-ZIP family protein
Zmw_sc02759.1.g00170.1HD-ZIP family protein
Zmw_sc03530.1.g00010.1HD-ZIP family protein
Zmw_sc01408.1.g00140.1HD-ZIP family protein
Zmw_sc01228.1.g00070.1HD-ZIP family protein
Zmw_sc00911.1.g00130.1HD-ZIP family protein
Zmw_sc02299.1.g00130.1HD-ZIP family protein
Zmw_sc00389.1.g00130.1HD-ZIP family protein
Zmw_sc03085.1.g00040.1HD-ZIP family protein
Zmw_sc03489.1.g00080.1HD-ZIP family protein
Zmw_sc00561.1.g00160.1HD-ZIP family protein
Zmw_sc01274.1.g00100.1HD-ZIP family protein
Zmw_sc01004.1.g00110.1HD-ZIP family protein
Zmw_sc01514.1.g00070.1HD-ZIP family protein
Zmw_sc04848.1.g00060.1HD-ZIP family protein
Zmw_sc03183.1.g00010.1HD-ZIP family protein
Zmw_sc00213.1.g00080.1HD-ZIP family protein
Zmw_sc01627.1.g00040.1HD-ZIP family protein
Zmw_sc02219.1.g00180.1HD-ZIP family protein
Zmw_sc05084.1.g00020.1HD-ZIP family protein
Zmw_sc01266.1.g00300.1HD-ZIP family protein
Zmw_sc00124.1.g00300.1HD-ZIP family protein
Zmw_sc03086.1.g00110.1HD-ZIP family protein
Zmw_sc04848.1.g00030.1HD-ZIP family protein
Zmw_sc04581.1.g00030.1HD-ZIP family protein
Zmw_sc02186.1.g00030.1HD-ZIP family protein
Zmw_sc00670.1.g00030.1HD-ZIP family protein
Zmw_sc02891.1.g00040.1HD-ZIP family protein
Zmw_sc05273.1.g00020.1HD-ZIP family protein
Zmw_sc03253.1.g00070.1HD-ZIP family protein
Zmw_sc00154.1.g00490.1HD-ZIP family protein
Zmw_sc00172.1.g00060.1HD-ZIP family protein
Zmw_sc02087.1.g00150.1HD-ZIP family protein
Zmw_sc03641.1.g00050.1HD-ZIP family protein
Zmw_sc03303.1.g00060.1HD-ZIP family protein
Zmw_sc05101.1.g00050.1HD-ZIP family protein
Zmw_sc00725.1.g00040.1HD-ZIP family protein
Zmw_sc03294.1.g00080.1HD-ZIP family protein
Zmw_sc00137.1.g00240.1HD-ZIP family protein
Zmw_sc00064.1.g00250.1HD-ZIP family protein
Zmw_sc05278.1.g00010.1HD-ZIP family protein
Zmw_sc00430.1.g00390.1HD-ZIP family protein
Zmw_sc00551.1.g00390.1HD-ZIP family protein
Zmw_sc01608.1.g00080.1HD-ZIP family protein
Zmw_sc04269.1.g00060.1HD-ZIP family protein
Zmw_sc02633.1.g00060.1HD-ZIP family protein
Zmw_sc03232.1.g00050.1HD-ZIP family protein
Zmw_sc02918.1.g00160.1HD-ZIP family protein
Zmw_sc02219.1.g00130.1HD-ZIP family protein
Zmw_sc01857.1.g00180.1HD-ZIP family protein
Zmw_sc00107.1.g00160.1HD-ZIP family protein
Zmw_sc01596.1.g00280.1HD-ZIP family protein
Zmw_sc02674.1.g00050.1HD-ZIP family protein
Zmw_sc01111.1.g00030.1HD-ZIP family protein
Zmw_sc01170.1.g00210.1HD-ZIP family protein
Zmw_sc05132.1.g00010.1HD-ZIP family protein
Zmw_sc00423.1.g00150.1HD-ZIP family protein
Zmw_sc01805.1.g00230.1HD-ZIP family protein
Zmw_sc04905.1.g00030.1HD-ZIP family protein
Zmw_sc03012.1.g00110.1HD-ZIP family protein
Zmw_sc03668.1.g00100.1HD-ZIP family protein
Zmw_sc03877.1.g00080.1HD-ZIP family protein
Zmw_sc03202.1.g00130.1HD-ZIP family protein
Zmw_sc03290.1.g00150.1HD-ZIP family protein
Zmw_sc01720.1.g00010.1HD-ZIP family protein
Zmw_sc01070.1.g00090.1HD-ZIP family protein
Zmw_sc00970.1.g00030.1HD-ZIP family protein
Zmw_sc01702.1.g00130.1HD-ZIP family protein
Zmw_sc02184.1.g00180.1HD-ZIP family protein
Zmw_sc00942.1.g00260.1HD-ZIP family protein
Zmw_sc01058.1.g00130.1HD-ZIP family protein
Zmw_sc01756.1.g00180.1HD-ZIP family protein
Zmw_sc01747.1.g00060.1HD-ZIP family protein
Zmw_sc01534.1.g00070.1HD-ZIP family protein
Zmw_sc02178.1.g00030.1HD-ZIP family protein
Zmw_sc00804.1.g00030.1HD-ZIP family protein
Zmw_sc03149.1.g00110.1HD-ZIP family protein
Zmw_sc00616.1.g00080.1HD-ZIP family protein
Zmw_sc01057.1.g00020.1HD-ZIP family protein
Zmw_sc05542.1.g00030.1HD-ZIP family protein
Zmw_sc00433.1.g00450.1HD-ZIP family protein
Zmw_sc01250.1.g00160.1HD-ZIP family protein
Zmw_sc01742.1.g00130.1HD-ZIP family protein
Zmw_sc03760.1.g00020.1HD-ZIP family protein
Zmw_sc02469.1.g00170.1HD-ZIP family protein
Zmw_sc06747.1.g00060.1HD-ZIP family protein
Zmw_sc04272.1.g00050.1HD-ZIP family protein
Zmw_sc01275.1.g00180.1HD-ZIP family protein
Zmw_sc01376.1.g00070.1HD-ZIP family protein
Zmw_sc01434.1.g00190.1HD-ZIP family protein
Zmw_sc00801.1.g00170.1HD-ZIP family protein
Zmw_sc01946.1.g00030.1HD-ZIP family protein
Zmw_sc03579.1.g00060.1HD-ZIP family protein
Zmw_sc00890.1.g00320.1HD-ZIP family protein
Zmw_sc00918.1.g00100.1HD-ZIP family protein
Zmw_sc02695.1.g00190.1HD-ZIP family protein
Zmw_sc01080.1.g00180.1HD-ZIP family protein
Zmw_sc02585.1.g00060.1HD-ZIP family protein
Zmw_sc06757.1.g00010.1HD-ZIP family protein
Zmw_sc01600.1.g00130.1HD-ZIP family protein
Zmw_sc05116.1.g00020.1HD-ZIP family protein
Zmw_sc02415.1.g00070.1HD-ZIP family protein
Zmw_sc01648.1.g00090.1HD-ZIP family protein
Zmw_sc10007.1.g00010.1HD-ZIP family protein
Zmw_sc00565.1.g00030.1HD-ZIP family protein
Zmw_sc00382.1.g00190.1HD-ZIP family protein
Zmw_sc05408.1.g00080.1HD-ZIP family protein
Zmw_sc03170.1.g00020.1HD-ZIP family protein
HD-ZIP Family Introduction

A homeobox (HB) encodes a protein domain, the homeodomain (HD), which is a conserved 60-amino acid motif present in transcription factors found in all the eukaryotic organisms. This 60-amino acid sequence folds into a characteristic three-helix structure that is able to interact specifically with DNA. Most HDs are able to bind DNA as monomers with high affinity, through interactions made by helix III (the so-called recognition helix) and a disordered N-terminal arm located beyond helix I. The high degree of conservation of this type of domain among diverse proteins from different kingdoms indicates that this structure is crucial to maintain the HD functionality and that the role played by this domain is vital.

Members of the HD-Zip family have a leucine zipper motif (LZ) immediately downstream of the HD. The two motifs are present in transcription factors found in species belonging to other eukaryotic kingdoms, but their association in a single protein is unique to plants. The HD is responsible for the specific binding to DNA, whereas LZ acts as a dimerization motif. HD-Zip proteins bind to DNA as dimers, and the absence of LZ absolutely abolishes their binding ability, which indicates that the relative orientation of the monomers, driven by this motif, is crucial for an efficient recognition of DNA.

Ariel FD, Manavella PA, Dezar CA, Chan RL.
The true story of the HD-Zip family.
Trends Plant Sci, 2007. 12(9): p. 419-26.
PMID: 17698401