PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Zostera marina
FAR1 Family
Species TF ID Description
Zosma101g00420.1FAR1 family protein
Zosma104g00010.1FAR1 family protein
Zosma105g00030.1FAR1 family protein
Zosma105g00310.1FAR1 family protein
Zosma105g00560.1FAR1 family protein
Zosma109g00470.1FAR1 family protein
Zosma10g00070.1FAR1 family protein
Zosma10g01010.1FAR1 family protein
Zosma110g00040.1FAR1 family protein
Zosma110g00110.1FAR1 family protein
Zosma114g00060.1FAR1 family protein
Zosma116g00430.1FAR1 family protein
Zosma117g00710.1FAR1 family protein
Zosma118g00080.1FAR1 family protein
Zosma118g00140.1FAR1 family protein
Zosma11g01070.1FAR1 family protein
Zosma120g00170.1FAR1 family protein
Zosma121g00740.1FAR1 family protein
Zosma145g00090.1FAR1 family protein
Zosma147g00040.1FAR1 family protein
Zosma147g00350.1FAR1 family protein
Zosma14g01800.1FAR1 family protein
Zosma150g00090.1FAR1 family protein
Zosma151g00250.1FAR1 family protein
Zosma151g00270.1FAR1 family protein
Zosma151g00300.1FAR1 family protein
Zosma161g00390.1FAR1 family protein
Zosma164g00410.1FAR1 family protein
Zosma170g00280.1FAR1 family protein
Zosma170g00540.1FAR1 family protein
Zosma175g00370.1FAR1 family protein
Zosma179g00140.1FAR1 family protein
Zosma17g00040.1FAR1 family protein
Zosma17g00060.1FAR1 family protein
Zosma17g00100.1FAR1 family protein
Zosma17g00260.1FAR1 family protein
Zosma17g01020.1FAR1 family protein
Zosma180g00320.1FAR1 family protein
Zosma182g00480.1FAR1 family protein
Zosma188g00270.1FAR1 family protein
Zosma189g00280.1FAR1 family protein
Zosma190g00030.1FAR1 family protein
Zosma197g00190.1FAR1 family protein
Zosma199g00350.1FAR1 family protein
Zosma205g00100.1FAR1 family protein
Zosma210g00090.1FAR1 family protein
Zosma213g00150.1FAR1 family protein
Zosma215g00430.1FAR1 family protein
Zosma215g00450.1FAR1 family protein
Zosma217g00030.1FAR1 family protein
Zosma22g01060.1FAR1 family protein
Zosma234g00240.1FAR1 family protein
Zosma236g00020.1FAR1 family protein
Zosma237g00010.1FAR1 family protein
Zosma23g00270.1FAR1 family protein
Zosma249g00080.1FAR1 family protein
Zosma255g00030.1FAR1 family protein
Zosma261g00260.1FAR1 family protein
Zosma266g00010.1FAR1 family protein
Zosma26g00320.1FAR1 family protein
Zosma26g00920.1FAR1 family protein
Zosma270g00050.1FAR1 family protein
Zosma275g00120.1FAR1 family protein
Zosma27g01490.1FAR1 family protein
Zosma28g00660.1FAR1 family protein
Zosma292g00010.1FAR1 family protein
Zosma298g00030.1FAR1 family protein
Zosma2g02740.1FAR1 family protein
Zosma303g00010.1FAR1 family protein
Zosma311g00010.1FAR1 family protein
Zosma314g00180.1FAR1 family protein
Zosma31g00420.1FAR1 family protein
Zosma323g00090.1FAR1 family protein
Zosma325g00010.1FAR1 family protein
Zosma32g00070.1FAR1 family protein
Zosma32g00510.1FAR1 family protein
Zosma32g00530.1FAR1 family protein
Zosma33g00700.1FAR1 family protein
Zosma33g00800.1FAR1 family protein
Zosma351g00200.1FAR1 family protein
Zosma355g00050.1FAR1 family protein
Zosma369g00010.1FAR1 family protein
Zosma371g00060.1FAR1 family protein
Zosma393g00020.1FAR1 family protein
Zosma3g01400.1FAR1 family protein
Zosma3g01410.1FAR1 family protein
Zosma44g01640.1FAR1 family protein
Zosma45g00010.1FAR1 family protein
Zosma45g00450.1FAR1 family protein
Zosma45g00810.1FAR1 family protein
Zosma49g01130.1FAR1 family protein
Zosma4g00810.1FAR1 family protein
Zosma51g00500.1FAR1 family protein
Zosma54g00590.1FAR1 family protein
Zosma57g00090.1FAR1 family protein
Zosma600g00010.1FAR1 family protein
Zosma63g00510.1FAR1 family protein
Zosma66g00860.1FAR1 family protein
Zosma67g00070.1FAR1 family protein
Zosma67g00100.1FAR1 family protein
Zosma67g00700.1FAR1 family protein
Zosma6g01860.1FAR1 family protein
Zosma71g00200.1FAR1 family protein
Zosma738g00020.1FAR1 family protein
Zosma74g00580.1FAR1 family protein
Zosma761g00020.1FAR1 family protein
Zosma76g00090.1FAR1 family protein
Zosma76g00950.1FAR1 family protein
Zosma77g00520.1FAR1 family protein
Zosma782g00020.1FAR1 family protein
Zosma78g00340.1FAR1 family protein
Zosma7g01710.1FAR1 family protein
Zosma82g00440.1FAR1 family protein
Zosma83g00390.1FAR1 family protein
Zosma86g00620.1FAR1 family protein
Zosma86g00630.1FAR1 family protein
Zosma873g00020.1FAR1 family protein
Zosma87g00060.1FAR1 family protein
Zosma94g00450.1FAR1 family protein
Zosma95g00160.1FAR1 family protein
Zosma96g00070.1FAR1 family protein
Zosma99g00310.1FAR1 family protein
Zosma99g00410.1FAR1 family protein
FAR1 Family Introduction

We show that Arabidopsis FHY3 and FAR1, which encode two proteins related to Mutator-like transposases, act together to modulate phyA signaling by directly activating the transcription of FHY1 and FHL, whose products are essential for light-induced phyA nuclear accumulation and subsequent light responses. FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.

We next used a yeast one-hybrid assay to delineate the DNA sequences to which FHY3 and FAR1 bind. GAD-FHY3 or GAD-FAR1 fusion proteins (GAD, GAL4 transcriptional activation domain), but not GAD alone, activated the LacZ reporter genes driven by the FHY1 and FHL promoters. Deletion analysis narrowed down the FHY3/FAR1 binding site to a 39-bp promoter subfragment located on the "a" fragment for both FHY1 and FHL. Notably, these subfragments share a stretch of consensus sequence, 5'-TTCACGCGCC-3'. Mutating the core sequence "CACGCGC" of this motif (m2 and m3 for FHY1, m5 for FHL) abolished the reporter gene activation by both GAD-FHY3 and GAD-FAR1. Mutating the flanking sequences (m1 and m4) did not obviously affect the reporter gene activation by GAD-FAR1, but clearly reduced activation by GAD-FHY3. Thus, "CACGCGC" likely defines a cis-element that confers specific binding for FHY3 and FAR1 and is named FBS for FHY3-FAR1 binding site.

Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H.
Transposase-derived transcription factors regulate light signaling in Arabidopsis.
Science, 2007. 318(5854): p. 1302-5.
PMID: 18033885