PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Solanum pimpinellifolium
GATA Family
Species TF ID Description
Sopim01g060490.0.1GATA family protein
Sopim01g090760.0.1GATA family protein
Sopim01g100220.0.1GATA family protein
Sopim01g106030.0.1GATA family protein
Sopim01g106040.0.1GATA family protein
Sopim01g110310.0.1GATA family protein
Sopim02g062380.0.1GATA family protein
Sopim02g062760.0.1GATA family protein
Sopim02g084590.0.1GATA family protein
Sopim02g085190.0.1GATA family protein
Sopim03g033660.0.1GATA family protein
Sopim03g120890.0.1GATA family protein
Sopim04g015360.0.1GATA family protein
Sopim04g076530.0.1GATA family protein
Sopim05g053500.0.1GATA family protein
Sopim05g054400.0.1GATA family protein
Sopim05g056120.0.1GATA family protein
Sopim06g060940.0.1GATA family protein
Sopim06g075140.0.1GATA family protein
Sopim07g038160.0.1GATA family protein
Sopim08g007190.0.1GATA family protein
Sopim08g066510.0.1GATA family protein
Sopim08g077960.0.1GATA family protein
Sopim09g075610.0.1GATA family protein
Sopim09g091250.0.1GATA family protein
Sopim10g018560.0.1GATA family protein
Sopim10g047640.0.1GATA family protein
Sopim11g069510.0.1GATA family protein
Sopim12g008830.0.1GATA family protein
Sopim12g099370.0.1GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008