PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Solanum pennellii
LBD Family
Species TF ID Description
Sopen01g018650.1LBD family protein
Sopen01g037180.1LBD family protein
Sopen01g041800.1LBD family protein
Sopen01g049450.1LBD family protein
Sopen02g015280.1LBD family protein
Sopen02g016910.1LBD family protein
Sopen02g018580.1LBD family protein
Sopen02g022280.1LBD family protein
Sopen02g030580.1LBD family protein
Sopen02g031200.1LBD family protein
Sopen02g035110.1LBD family protein
Sopen02g037120.1LBD family protein
Sopen03g015500.1LBD family protein
Sopen03g025940.1LBD family protein
Sopen03g031510.1LBD family protein
Sopen03g032410.1LBD family protein
Sopen03g038360.1LBD family protein
Sopen04g020660.1LBD family protein
Sopen04g031590.1LBD family protein
Sopen05g005070.1LBD family protein
Sopen05g028040.1LBD family protein
Sopen06g001080.1LBD family protein
Sopen06g002330.1LBD family protein
Sopen06g015880.1LBD family protein
Sopen06g016740.1LBD family protein
Sopen06g022110.1LBD family protein
Sopen06g027970.1LBD family protein
Sopen06g031750.1LBD family protein
Sopen06g033700.1LBD family protein
Sopen06g033810.1LBD family protein
Sopen06g034130.1LBD family protein
Sopen06g035330.1LBD family protein
Sopen09g027960.1LBD family protein
Sopen09g027970.1LBD family protein
Sopen11g004610.1LBD family protein
Sopen11g021180.1LBD family protein
Sopen11g030110.1LBD family protein
Sopen12g034780.1LBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740