PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Solanum pennellii
ARF Family
Species TF ID Description
Sopen01g039790.1ARF family protein
Sopen01g045470.1ARF family protein
Sopen02g011920.1ARF family protein
Sopen02g022450.1ARF family protein
Sopen02g022450.2ARF family protein
Sopen03g005820.1ARF family protein
Sopen03g005820.2ARF family protein
Sopen03g037200.1ARF family protein
Sopen04g034850.1ARF family protein
Sopen05g027770.1ARF family protein
Sopen05g034450.1ARF family protein
Sopen06g031560.1ARF family protein
Sopen07g021880.1ARF family protein
Sopen07g023180.1ARF family protein
Sopen08g004260.1ARF family protein
Sopen08g004260.2ARF family protein
Sopen08g030870.1ARF family protein
Sopen09g002650.1ARF family protein
Sopen10g035510.1ARF family protein
Sopen11g008490.1ARF family protein
Sopen11g027930.1ARF family protein
Sopen11g028210.1ARF family protein
Sopen12g002300.1ARF family protein
Sopen12g002300.2ARF family protein
Sopen12g021160.1ARF family protein
ARF Family Introduction

Auxin response factors (ARF) are transcription factors that regulate the expression of auxin response genes. ARFs bind with specificity to TGTCTC auxin response elements (AuxRE) in promoters of these genes and function in combination with Aux/IAA (auxin/indole acetic acid) repressors, which dimerize with ARF activators in an auxin-regulated manner.

Most ARFs consist of an amino-terminal DNA-binding domain (DBD), a middle region that functions as an activation domain (AD) or repression domain (RD), and a carboxy-terminal dimerization domain (CTD). The ARF DBD is classified as a plant-specific B3-type, but requires additional amino-terminal and carboxy-terminal amino acids for efficient in vitro binding to TGTCTC AuxREs.

The ARF ADs and RDs are located just carboxy-terminal to the DBDs and contain biased amino acid sequences. ARF ADs are enriched in glutamine along with serine and leucine residues, while ARF RDs are enriched in serine, proline, leucine and glycine residues.

Guilfoyle TJ, Hagen G.
Auxin response factors.
Curr Opin Plant Biol, 2007. 10(5): p. 453-60.
PMID: 17900969