PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Solanum lycopersicum
ARF Family
Species TF ID Description
Solyc00g196060.2.1ARF family protein
Solyc01g096070.2.1ARF family protein
Solyc01g103050.2.1ARF family protein
Solyc02g037530.2.1ARF family protein
Solyc02g077560.2.1ARF family protein
Solyc03g031970.2.1ARF family protein
Solyc03g118290.2.1ARF family protein
Solyc04g081240.2.1ARF family protein
Solyc05g047460.2.1ARF family protein
Solyc05g056040.2.1ARF family protein
Solyc06g075150.2.1ARF family protein
Solyc07g016180.2.1ARF family protein
Solyc07g042260.2.1ARF family protein
Solyc07g043620.2.1ARF family protein
Solyc08g008380.2.1ARF family protein
Solyc08g082630.2.1ARF family protein
Solyc09g007810.2.1ARF family protein
Solyc10g086130.1.1ARF family protein
Solyc11g013480.1.1ARF family protein
Solyc11g069190.1.1ARF family protein
Solyc11g069500.1.1ARF family protein
Solyc12g042070.1.1ARF family protein
ARF Family Introduction

Auxin response factors (ARF) are transcription factors that regulate the expression of auxin response genes. ARFs bind with specificity to TGTCTC auxin response elements (AuxRE) in promoters of these genes and function in combination with Aux/IAA (auxin/indole acetic acid) repressors, which dimerize with ARF activators in an auxin-regulated manner.

Most ARFs consist of an amino-terminal DNA-binding domain (DBD), a middle region that functions as an activation domain (AD) or repression domain (RD), and a carboxy-terminal dimerization domain (CTD). The ARF DBD is classified as a plant-specific B3-type, but requires additional amino-terminal and carboxy-terminal amino acids for efficient in vitro binding to TGTCTC AuxREs.

The ARF ADs and RDs are located just carboxy-terminal to the DBDs and contain biased amino acid sequences. ARF ADs are enriched in glutamine along with serine and leucine residues, while ARF RDs are enriched in serine, proline, leucine and glycine residues.

Guilfoyle TJ, Hagen G.
Auxin response factors.
Curr Opin Plant Biol, 2007. 10(5): p. 453-60.
PMID: 17900969