PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Raphanus raphanistrum
MYB Family
Species TF ID Description
RrC1007_p5MYB family protein
RrC10088_p1MYB family protein
RrC10208_p1MYB family protein
RrC10209_p1MYB family protein
RrC1026_p5MYB family protein
RrC10287_p1MYB family protein
RrC10536_p1MYB family protein
RrC10556_p3MYB family protein
RrC10559_p1MYB family protein
RrC1055_p5MYB family protein
RrC105_p3MYB family protein
RrC1095_p5MYB family protein
RrC11064_p1MYB family protein
RrC11106_p1MYB family protein
RrC11134_p2MYB family protein
RrC1117_p2MYB family protein
RrC11452_p1MYB family protein
RrC1153_p4MYB family protein
RrC11571_p1MYB family protein
RrC1163_p1MYB family protein
RrC117_p9MYB family protein
RrC11828_p1MYB family protein
RrC12265_p1MYB family protein
RrC12788_p1MYB family protein
RrC12872_p1MYB family protein
RrC1293_p1MYB family protein
RrC13048_p1MYB family protein
RrC13245_p1MYB family protein
RrC1338_p3MYB family protein
RrC1417_p6MYB family protein
RrC1418_p3MYB family protein
RrC1436_p1MYB family protein
RrC14395_p2MYB family protein
RrC14648_p1MYB family protein
RrC1476_p4MYB family protein
RrC14993_p1MYB family protein
RrC15097_p1MYB family protein
RrC15277_p1MYB family protein
RrC1559_p4MYB family protein
RrC15701_p1MYB family protein
RrC159_p9MYB family protein
RrC16213_p1MYB family protein
RrC1621_p1MYB family protein
RrC17042_p1MYB family protein
RrC1705_p5MYB family protein
RrC1710_p1MYB family protein
RrC172_p9MYB family protein
RrC1739_p2MYB family protein
RrC17489_p1MYB family protein
RrC17622_p1MYB family protein
RrC1783_p1MYB family protein
RrC17852_p1MYB family protein
RrC1789_p3MYB family protein
RrC18072_p1MYB family protein
RrC1807_p3MYB family protein
RrC1845_p3MYB family protein
RrC1881_p7MYB family protein
RrC192_p9MYB family protein
RrC193_p5MYB family protein
RrC1954_p1MYB family protein
RrC2010_p6MYB family protein
RrC21134_p1MYB family protein
RrC21251_p1MYB family protein
RrC212_p6MYB family protein
RrC21359_p1MYB family protein
RrC21591_p1MYB family protein
RrC21907_p1MYB family protein
RrC2200_p4MYB family protein
RrC2215_p2MYB family protein
RrC22497_p1MYB family protein
RrC225_p1MYB family protein
RrC22795_p1MYB family protein
RrC22_p1MYB family protein
RrC2310_p1MYB family protein
RrC2314_p2MYB family protein
RrC2377_p4MYB family protein
RrC2406_p3MYB family protein
RrC2421_p2MYB family protein
RrC247_p7MYB family protein
RrC25008_p1MYB family protein
RrC2512_p1MYB family protein
RrC2547_p1MYB family protein
RrC25548_p1MYB family protein
RrC25562_p1MYB family protein
RrC2660_p3MYB family protein
RrC2681_p1MYB family protein
RrC2737_p4MYB family protein
RrC2766_p3MYB family protein
RrC2775_p2MYB family protein
RrC286_p9MYB family protein
RrC2874_p5MYB family protein
RrC2878_p2MYB family protein
RrC2885_p1MYB family protein
RrC2932_p2MYB family protein
RrC2938_p2MYB family protein
RrC3086_p2MYB family protein
RrC309_p2MYB family protein
RrC30_p7MYB family protein
RrC3120_p1MYB family protein
RrC3129_p1MYB family protein
RrC3199_p2MYB family protein
RrC3218_p2MYB family protein
RrC3223_p3MYB family protein
RrC3259_p2MYB family protein
RrC3298_p1MYB family protein
RrC329_p3MYB family protein
RrC32_p6MYB family protein
RrC3301_p4MYB family protein
RrC3389_p3MYB family protein
RrC345_p8MYB family protein
RrC3591_p2MYB family protein
RrC366_p5MYB family protein
RrC369_p2MYB family protein
RrC3706_p2MYB family protein
RrC378_p7MYB family protein
RrC3832_p3MYB family protein
RrC389_p1MYB family protein
RrC39_p10MYB family protein
RrC3_p9MYB family protein
RrC403_p1MYB family protein
RrC4118_p3MYB family protein
RrC412_p2MYB family protein
RrC4188_p3MYB family protein
RrC424_p3MYB family protein
RrC434_p7MYB family protein
RrC4363_p1MYB family protein
RrC4408_p1MYB family protein
RrC4410_p1MYB family protein
RrC449_p2MYB family protein
RrC4566_p2MYB family protein
RrC463_p7MYB family protein
RrC489_p4MYB family protein
RrC4955_p1MYB family protein
RrC504_p6MYB family protein
RrC5096_p1MYB family protein
RrC5154_p3MYB family protein
RrC5256_p2MYB family protein
RrC5270_p1MYB family protein
RrC5279_p2MYB family protein
RrC538_p1MYB family protein
RrC540_p4MYB family protein
RrC5417_p2MYB family protein
RrC5443_p1MYB family protein
RrC547_p7MYB family protein
RrC5547_p3MYB family protein
RrC5549_p1MYB family protein
RrC5693_p2MYB family protein
RrC5793_p4MYB family protein
RrC5876_p2MYB family protein
RrC5929_p1MYB family protein
RrC594_p5MYB family protein
RrC6020_p1MYB family protein
RrC6041_p1MYB family protein
RrC605_p6MYB family protein
RrC6154_p2MYB family protein
RrC6346_p1MYB family protein
RrC6373_p1MYB family protein
RrC641_p4MYB family protein
RrC645_p7MYB family protein
RrC6550_p1MYB family protein
RrC6596_p1MYB family protein
RrC6693_p1MYB family protein
RrC6713_p3MYB family protein
RrC6819_p1MYB family protein
RrC6861_p1MYB family protein
RrC6927_p1MYB family protein
RrC695_p5MYB family protein
RrC699_p4MYB family protein
RrC6_p13MYB family protein
RrC7110_p1MYB family protein
RrC713_p4MYB family protein
RrC7190_p3MYB family protein
RrC7261_p2MYB family protein
RrC7473_p1MYB family protein
RrC752_p1MYB family protein
RrC7577_p1MYB family protein
RrC7609_p1MYB family protein
RrC7643_p2MYB family protein
RrC7670_p1MYB family protein
RrC831_p1MYB family protein
RrC8434_p3MYB family protein
RrC8474_p1MYB family protein
RrC8730_p2MYB family protein
RrC8766_p2MYB family protein
RrC8781_p1MYB family protein
RrC881_p7MYB family protein
RrC8851_p1MYB family protein
RrC8876_p1MYB family protein
RrC88_p1MYB family protein
RrC8921_p1MYB family protein
RrC9143_p1MYB family protein
RrC91_p9MYB family protein
RrC921_p1MYB family protein
RrC9393_p1MYB family protein
RrC93_p11MYB family protein
RrC9768_p1MYB family protein
RrC985_p1MYB family protein
RrC9952_p1MYB family protein
RrC9970_p1MYB family protein
MYB Family Introduction

MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.

In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.

Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504