PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Raphanus raphanistrum
GATA Family
Species TF ID Description
RrC1037_p1GATA family protein
RrC10994_p1GATA family protein
RrC1106_p1GATA family protein
RrC11093_p1GATA family protein
RrC1110_p4GATA family protein
RrC11643_p1GATA family protein
RrC11754_p1GATA family protein
RrC1181_p3GATA family protein
RrC12158_p1GATA family protein
RrC12312_p1GATA family protein
RrC12550_p1GATA family protein
RrC12599_p1GATA family protein
RrC12882_p1GATA family protein
RrC14297_p1GATA family protein
RrC1448_p1GATA family protein
RrC14786_p2GATA family protein
RrC1497_p1GATA family protein
RrC1635_p2GATA family protein
RrC1711_p1GATA family protein
RrC1846_p1GATA family protein
RrC18592_p1GATA family protein
RrC1961_p4GATA family protein
RrC2183_p3GATA family protein
RrC22956_p1GATA family protein
RrC23258_p1GATA family protein
RrC27316_p1GATA family protein
RrC28482_p1GATA family protein
RrC302_p4GATA family protein
RrC32435_p1GATA family protein
RrC3297_p1GATA family protein
RrC3451_p1GATA family protein
RrC3531_p3GATA family protein
RrC363_p6GATA family protein
RrC3653_p2GATA family protein
RrC378_p6GATA family protein
RrC3834_p4GATA family protein
RrC417_p8GATA family protein
RrC4620_p2GATA family protein
RrC4933_p3GATA family protein
RrC4986_p1GATA family protein
RrC5018_p2GATA family protein
RrC518_p3GATA family protein
RrC5531_p1GATA family protein
RrC6142_p4GATA family protein
RrC6672_p1GATA family protein
RrC6736_p1GATA family protein
RrC6772_p3GATA family protein
RrC680_p1GATA family protein
RrC7393_p1GATA family protein
RrC760_p3GATA family protein
RrC7_p6GATA family protein
RrC8004_p3GATA family protein
RrC8771_p1GATA family protein
RrC9027_p1GATA family protein
RrC9192_p1GATA family protein
RrC953_p1GATA family protein
RrC9887_p2GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008