PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Raphanus raphanistrum
ERF Family
Species TF ID Description
RrC10281_p1ERF family protein
RrC10305_p1ERF family protein
RrC1033_p4ERF family protein
RrC10501_p3ERF family protein
RrC10525_p1ERF family protein
RrC10760_p1ERF family protein
RrC10982_p1ERF family protein
RrC11177_p1ERF family protein
RrC1125_p1ERF family protein
RrC11264_p2ERF family protein
RrC1137_p2ERF family protein
RrC11511_p1ERF family protein
RrC1167_p2ERF family protein
RrC11784_p1ERF family protein
RrC12015_p2ERF family protein
RrC12135_p3ERF family protein
RrC12145_p1ERF family protein
RrC12153_p1ERF family protein
RrC12211_p1ERF family protein
RrC1222_p6ERF family protein
RrC1231_p4ERF family protein
RrC12413_p1ERF family protein
RrC12471_p1ERF family protein
RrC12757_p3ERF family protein
RrC12849_p1ERF family protein
RrC1286_p2ERF family protein
RrC12923_p1ERF family protein
RrC13346_p1ERF family protein
RrC13457_p1ERF family protein
RrC13650_p1ERF family protein
RrC13_p2ERF family protein
RrC14084_p1ERF family protein
RrC14485_p1ERF family protein
RrC14488_p2ERF family protein
RrC14731_p1ERF family protein
RrC1474_p2ERF family protein
RrC14808_p1ERF family protein
RrC15005_p1ERF family protein
RrC15006_p1ERF family protein
RrC15163_p1ERF family protein
RrC15266_p1ERF family protein
RrC15304_p2ERF family protein
RrC1534_p2ERF family protein
RrC1536_p3ERF family protein
RrC1538_p3ERF family protein
RrC15486_p1ERF family protein
RrC15528_p1ERF family protein
RrC15566_p1ERF family protein
RrC15917_p1ERF family protein
RrC15975_p1ERF family protein
RrC15989_p2ERF family protein
RrC16275_p1ERF family protein
RrC16317_p1ERF family protein
RrC1642_p3ERF family protein
RrC16456_p1ERF family protein
RrC164_p6ERF family protein
RrC16793_p1ERF family protein
RrC16963_p1ERF family protein
RrC16963_p2ERF family protein
RrC1700_p1ERF family protein
RrC1729_p3ERF family protein
RrC17481_p1ERF family protein
RrC17549_p1ERF family protein
RrC17602_p1ERF family protein
RrC1777_p1ERF family protein
RrC17807_p1ERF family protein
RrC18109_p1ERF family protein
RrC18251_p1ERF family protein
RrC1832_p1ERF family protein
RrC1850_p4ERF family protein
RrC18596_p1ERF family protein
RrC18700_p1ERF family protein
RrC18818_p1ERF family protein
RrC18904_p1ERF family protein
RrC19205_p1ERF family protein
RrC193_p4ERF family protein
RrC19588_p1ERF family protein
RrC198_p1ERF family protein
RrC1_p3ERF family protein
RrC20119_p1ERF family protein
RrC2084_p1ERF family protein
RrC21202_p1ERF family protein
RrC21253_p1ERF family protein
RrC220_p1ERF family protein
RrC22672_p1ERF family protein
RrC2267_p4ERF family protein
RrC2315_p2ERF family protein
RrC2315_p3ERF family protein
RrC2318_p6ERF family protein
RrC23245_p1ERF family protein
RrC2344_p2ERF family protein
RrC23550_p1ERF family protein
RrC24679_p1ERF family protein
RrC2488_p1ERF family protein
RrC2491_p2ERF family protein
RrC25395_p1ERF family protein
RrC25501_p1ERF family protein
RrC2559_p3ERF family protein
RrC25656_p1ERF family protein
RrC2597_p1ERF family protein
RrC25_p3ERF family protein
RrC2624_p4ERF family protein
RrC26695_p1ERF family protein
RrC27332_p1ERF family protein
RrC2750_p1ERF family protein
RrC2775_p1ERF family protein
RrC2793_p1ERF family protein
RrC27_p4ERF family protein
RrC28733_p1ERF family protein
RrC28757_p1ERF family protein
RrC2906_p1ERF family protein
RrC2916_p2ERF family protein
RrC2925_p2ERF family protein
RrC293_p3ERF family protein
RrC29822_p1ERF family protein
RrC2993_p3ERF family protein
RrC2_p18ERF family protein
RrC304_p3ERF family protein
RrC3053_p1ERF family protein
RrC3070_p1ERF family protein
RrC3117_p1ERF family protein
RrC311_p1ERF family protein
RrC3183_p1ERF family protein
RrC32034_p1ERF family protein
RrC3244_p1ERF family protein
RrC3265_p2ERF family protein
RrC333_p4ERF family protein
RrC3343_p1ERF family protein
RrC336_p6ERF family protein
RrC3378_p1ERF family protein
RrC338_p6ERF family protein
RrC3474_p3ERF family protein
RrC349_p3ERF family protein
RrC349_p4ERF family protein
RrC3527_p1ERF family protein
RrC3527_p2ERF family protein
RrC365_p1ERF family protein
RrC3747_p4ERF family protein
RrC3785_p2ERF family protein
RrC38046_p1ERF family protein
RrC3821_p2ERF family protein
RrC3845_p1ERF family protein
RrC38_p4ERF family protein
RrC40987_p1ERF family protein
RrC415_p1ERF family protein
RrC4304_p1ERF family protein
RrC4325_p2ERF family protein
RrC43820_p1ERF family protein
RrC4547_p1ERF family protein
RrC4553_p1ERF family protein
RrC45_p14ERF family protein
RrC4612_p3ERF family protein
RrC4621_p1ERF family protein
RrC4817_p2ERF family protein
RrC4874_p2ERF family protein
RrC4930_p1ERF family protein
RrC4949_p1ERF family protein
RrC4_p19ERF family protein
RrC5027_p3ERF family protein
RrC5155_p2ERF family protein
RrC5163_p2ERF family protein
RrC522_p7ERF family protein
RrC5406_p2ERF family protein
RrC541_p5ERF family protein
RrC5474_p1ERF family protein
RrC5577_p1ERF family protein
RrC5600_p1ERF family protein
RrC5657_p1ERF family protein
RrC5734_p3ERF family protein
RrC5795_p4ERF family protein
RrC5809_p1ERF family protein
RrC591_p9ERF family protein
RrC6067_p1ERF family protein
RrC606_p8ERF family protein
RrC6123_p1ERF family protein
RrC6214_p1ERF family protein
RrC621_p7ERF family protein
RrC6222_p1ERF family protein
RrC6384_p2ERF family protein
RrC6509_p1ERF family protein
RrC651_p3ERF family protein
RrC6691_p3ERF family protein
RrC6821_p4ERF family protein
RrC683_p3ERF family protein
RrC6887_p2ERF family protein
RrC702_p1ERF family protein
RrC7044_p2ERF family protein
RrC7163_p1ERF family protein
RrC7309_p3ERF family protein
RrC7409_p2ERF family protein
RrC7413_p2ERF family protein
RrC7529_p1ERF family protein
RrC7573_p2ERF family protein
RrC7650_p1ERF family protein
RrC7663_p1ERF family protein
RrC7859_p1ERF family protein
RrC7888_p2ERF family protein
RrC7896_p1ERF family protein
RrC78_p6ERF family protein
RrC7_p13ERF family protein
RrC8078_p1ERF family protein
RrC8093_p1ERF family protein
RrC8172_p1ERF family protein
RrC81_p8ERF family protein
RrC8218_p3ERF family protein
RrC8304_p1ERF family protein
RrC8375_p1ERF family protein
RrC841_p6ERF family protein
RrC844_p6ERF family protein
RrC845_p4ERF family protein
RrC8501_p1ERF family protein
RrC8634_p1ERF family protein
RrC8840_p1ERF family protein
RrC886_p2ERF family protein
RrC8888_p1ERF family protein
RrC8888_p2ERF family protein
RrC8975_p1ERF family protein
RrC9001_p1ERF family protein
RrC9055_p1ERF family protein
RrC9238_p1ERF family protein
RrC9261_p1ERF family protein
RrC945_p1ERF family protein
RrC958_p2ERF family protein
RrC9723_p1ERF family protein
RrC9797_p1ERF family protein
RrC9830_p1ERF family protein
RrC9_p6ERF family protein
ERF Family Introduction

The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.

It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.

After finding the tobacco ERFs, many proteins in the ERF family were identified and implicated in many diverse functions in cellular processes, such as hormonal signal transduction, response to biotic and abiotic stresses, regulation of metabolism, and in developmental processes in various plant species.

Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444


The first class are proteins which bind to ethylene response elements (ERE) or GCC boxes (tobacco EREBPs, Arabidopsis AtEBP and AtERF1-5, and tomato Pti4-6) found in the promoters of ethylene-inducible pathogenesis related genes. The GCC box is an 11 bp sequence (TAAGAGCCGCC) with a core GCCGCC sequence that is required for binding.
The second class includes proteins that bind to the C-repeat or dehydration response element (DRE) in the promoters of genes that are turned on in response to low temperatures and/or water deficit (CBF1, CBF2, CBF3/DREB1A and DREB2A). The C-repeat/DREs contain the core sequence CCGAC.

Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102