PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Ocimum tenuiflorum
GATA Family
Species TF ID Description
Ote100015360061GATA family protein
Ote100022550201GATA family protein
Ote100029390001GATA family protein
Ote100032770031GATA family protein
Ote100054180051GATA family protein
Ote100073570141GATA family protein
Ote100073930041GATA family protein
Ote100080280041GATA family protein
Ote100107450161GATA family protein
Ote100111970121GATA family protein
Ote100134910121GATA family protein
Ote100140410031GATA family protein
Ote100140410032GATA family protein
Ote100144650191GATA family protein
Ote100160850011GATA family protein
Ote100171360101GATA family protein
Ote100186560001GATA family protein
Ote100190240051GATA family protein
Ote100190950121GATA family protein
Ote100196230021GATA family protein
Ote100201070011GATA family protein
Ote100206720021GATA family protein
Ote100216830041GATA family protein
Ote100227730021GATA family protein
Ote100259820031GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008