PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Oryza rufipogon
AP2 Family
Species TF ID Description
ORUFI01G38130.1AP2 family protein
ORUFI01G43970.1AP2 family protein
ORUFI02G25430.1AP2 family protein
ORUFI02G34150.1AP2 family protein
ORUFI02G34150.4AP2 family protein
ORUFI03G05420.1AP2 family protein
ORUFI03G09610.1AP2 family protein
ORUFI03G15620.1AP2 family protein
ORUFI03G37050.1AP2 family protein
ORUFI03G40640.1AP2 family protein
ORUFI03G40640.2AP2 family protein
ORUFI04G19390.1AP2 family protein
ORUFI04G29120.1AP2 family protein
ORUFI04G29120.2AP2 family protein
ORUFI04G29120.3AP2 family protein
ORUFI04G29120.4AP2 family protein
ORUFI04G29120.5AP2 family protein
ORUFI04G29120.6AP2 family protein
ORUFI04G29120.7AP2 family protein
ORUFI04G29440.1AP2 family protein
ORUFI05G25590.1AP2 family protein
ORUFI06G03000.1AP2 family protein
ORUFI06G23930.1AP2 family protein
ORUFI07G01630.1AP2 family protein
ORUFI07G08180.1AP2 family protein
ORUFI07G08180.2AP2 family protein
ORUFI08G04760.1AP2 family protein
ORUFI08G18170.1AP2 family protein
ORUFI08G24960.1AP2 family protein
ORUFI09G11510.1AP2 family protein
ORUFI09G11510.2AP2 family protein
ORUFI11G10800.1AP2 family protein
ORUFI09G11510.3AP2 family protein
ORUFI12G01770.1AP2 family protein
ORUFI05G01620.1AP2 family protein
ORUFI05G01620.2AP2 family protein
ORUFI05G16140.1AP2 family protein
AP2 Family Introduction

The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.

It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.

Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development, spikelet meristem determinacy, leaf epidermal cell identity, and embryo development.

Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444

Using an in vitro selection procedure, the DNA binding specificity of the two AP2 repeat containing protein ANT was found to be 5'-gCAC(A/G)N(A/T)TcCC(a/g)ANG(c/t)-3'. This consensus site is much longer than sites recognized by proteins containing a single AP2 repeat and neither AP2 repeat of ANT was alone capable of binding to the selected sequences, suggesting that both AP2 repeats make DNA contacts.

Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102