PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Oryza punctata
LBD Family
Species TF ID Description
OPUNC01G01670.1LBD family protein
OPUNC01G08860.1LBD family protein
OPUNC01G18000.1LBD family protein
OPUNC01G20540.1LBD family protein
OPUNC01G31580.1LBD family protein
OPUNC01G34540.1LBD family protein
OPUNC01G34540.2LBD family protein
OPUNC01G38680.1LBD family protein
OPUNC01G38680.2LBD family protein
OPUNC02G34750.1LBD family protein
OPUNC03G03510.1LBD family protein
OPUNC03G03520.1LBD family protein
OPUNC03G10080.1LBD family protein
OPUNC03G12790.1LBD family protein
OPUNC03G21330.1LBD family protein
OPUNC03G23160.1LBD family protein
OPUNC03G23800.1LBD family protein
OPUNC03G25820.1LBD family protein
OPUNC03G33890.1LBD family protein
OPUNC05G01600.1LBD family protein
OPUNC05G01610.1LBD family protein
OPUNC05G04180.1LBD family protein
OPUNC05G10670.1LBD family protein
OPUNC07G19440.1LBD family protein
OPUNC07G19440.2LBD family protein
OPUNC07G19460.1LBD family protein
OPUNC07G19460.2LBD family protein
OPUNC08G03850.1LBD family protein
OPUNC08G12580.1LBD family protein
OPUNC08G18660.1LBD family protein
OPUNC08G21770.1LBD family protein
OPUNC09G06360.1LBD family protein
OPUNC10G02630.1LBD family protein
OPUNC12G00430.1LBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740