PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Oryza nivara
GATA Family
Species TF ID Description
ONIVA01G28750.1GATA family protein
ONIVA01G34990.1GATA family protein
ONIVA01G52080.1GATA family protein
ONIVA02G03810.1GATA family protein
ONIVA02G28320.1GATA family protein
ONIVA02G38990.1GATA family protein
ONIVA03G03270.1GATA family protein
ONIVA03G05970.1GATA family protein
ONIVA03G31130.1GATA family protein
ONIVA03G34920.1GATA family protein
ONIVA03G41600.1GATA family protein
ONIVA04G04160.1GATA family protein
ONIVA04G18420.1GATA family protein
ONIVA04G18420.2GATA family protein
ONIVA04G18740.1GATA family protein
ONIVA05G04240.1GATA family protein
ONIVA05G29020.1GATA family protein
ONIVA06G22870.1GATA family protein
ONIVA06G22870.2GATA family protein
ONIVA06G22870.3GATA family protein
ONIVA06G28780.1GATA family protein
ONIVA07G07670.1GATA family protein
ONIVA10G11610.1GATA family protein
ONIVA10G13440.1GATA family protein
ONIVA10G20780.1GATA family protein
ONIVA11G03260.1GATA family protein
ONIVA11G05790.1GATA family protein
ONIVA12G03860.1GATA family protein
ONIVA12G03860.2GATA family protein
ONIVA12G18290.1GATA family protein
ONIVA12G18290.2GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008