PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Oryza nivara
B3 Family
Species TF ID Description
ONIVA01G11020.1B3 family protein
ONIVA01G11020.2B3 family protein
ONIVA01G32780.1B3 family protein
ONIVA01G33580.1B3 family protein
ONIVA01G33600.1B3 family protein
ONIVA01G45080.1B3 family protein
ONIVA01G46020.1B3 family protein
ONIVA01G46510.1B3 family protein
ONIVA02G06710.1B3 family protein
ONIVA02G16090.1B3 family protein
ONIVA02G17180.1B3 family protein
ONIVA02G17190.1B3 family protein
ONIVA02G25740.1B3 family protein
ONIVA02G30750.1B3 family protein
ONIVA02G36080.1B3 family protein
ONIVA02G36080.2B3 family protein
ONIVA02G36080.3B3 family protein
ONIVA03G04550.1B3 family protein
ONIVA03G04550.2B3 family protein
ONIVA03G08330.1B3 family protein
ONIVA03G08950.1B3 family protein
ONIVA03G08950.2B3 family protein
ONIVA03G08950.4B3 family protein
ONIVA03G27260.1B3 family protein
ONIVA03G27270.1B3 family protein
ONIVA03G27270.2B3 family protein
ONIVA03G27320.1B3 family protein
ONIVA03G27320.2B3 family protein
ONIVA03G27360.1B3 family protein
ONIVA03G27380.1B3 family protein
ONIVA03G41660.1B3 family protein
ONIVA03G41670.1B3 family protein
ONIVA03G41700.1B3 family protein
ONIVA04G06690.1B3 family protein
ONIVA04G06710.1B3 family protein
ONIVA04G08240.1B3 family protein
ONIVA04G22030.1B3 family protein
ONIVA04G28090.1B3 family protein
ONIVA04G28090.2B3 family protein
ONIVA06G00500.1B3 family protein
ONIVA06G00810.2B3 family protein
ONIVA06G07020.1B3 family protein
ONIVA06G25740.1B3 family protein
ONIVA07G04110.1B3 family protein
ONIVA07G04120.1B3 family protein
ONIVA07G17160.1B3 family protein
ONIVA07G22860.1B3 family protein
ONIVA07G26110.1B3 family protein
ONIVA07G26110.2B3 family protein
ONIVA08G00050.1B3 family protein
ONIVA08G00050.2B3 family protein
ONIVA08G00050.3B3 family protein
ONIVA08G03420.1B3 family protein
ONIVA08G05080.1B3 family protein
ONIVA08G05080.2B3 family protein
ONIVA08G11320.1B3 family protein
ONIVA10G02490.1B3 family protein
ONIVA10G05120.1B3 family protein
ONIVA10G05120.2B3 family protein
ONIVA10G18740.1B3 family protein
ONIVA11G15890.1B3 family protein
ONIVA11G16350.1B3 family protein
ONIVA11G16350.2B3 family protein
ONIVA11G16350.3B3 family protein
ONIVA12G03130.1B3 family protein
ONIVA12G15340.1B3 family protein
B3 Family Introduction

The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.

All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1). The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Swaminathan K, Peterson K, Jack T.
The plant B3 superfamily.
Trends Plant Sci, 2008. 13(12): p. 647-55.
PMID: 18986826

Note: In plantTFDB, B3 family includes LAV family, REM family, and RAV family (those do not contain AP2 domain).