PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Oryza longistaminata
LBD Family
Species TF ID Description
AMDW01018498.1_FGP001LBD family protein
AMDW01065961.1_FGP001LBD family protein
AMDW01126071.1_FGP004LBD family protein
AMDW01132047.1_FGP001LBD family protein
KN538681.1_FGP207LBD family protein
KN538703.1_FGP012LBD family protein
KN538795.1_FGP038LBD family protein
KN538867.1_FGP002LBD family protein
KN538985.1_FGP008LBD family protein
KN538990.1_FGP001LBD family protein
KN539152.1_FGP009LBD family protein
KN539387.1_FGP008LBD family protein
KN539511.1_FGP007LBD family protein
KN539511.1_FGP010LBD family protein
KN539660.1_FGP007LBD family protein
KN539694.1_FGP007LBD family protein
KN540035.1_FGP004LBD family protein
KN540177.1_FGP004LBD family protein
KN540273.1_FGP002LBD family protein
KN540669.1_FGP001LBD family protein
KN540729.1_FGP002LBD family protein
KN541271.1_FGP001LBD family protein
KN541603.1_FGP002LBD family protein
KN542820.1_FGP001LBD family protein
KN543670.1_FGP001LBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740