PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Oryza longistaminata
ERF Family
Species TF ID Description
AMDW01024215.1_FGP001ERF family protein
KN538686.1_FGP012ERF family protein
KN538737.1_FGP011ERF family protein
KN538761.1_FGP005ERF family protein
KN538795.1_FGP047ERF family protein
KN538802.1_FGP008ERF family protein
KN538855.1_FGP004ERF family protein
KN538868.1_FGP011ERF family protein
KN538910.1_FGP013ERF family protein
KN538953.1_FGP014ERF family protein
KN538997.1_FGP001ERF family protein
KN539005.1_FGP012ERF family protein
KN539073.1_FGP013ERF family protein
KN539222.1_FGP003ERF family protein
KN539288.1_FGP018ERF family protein
KN539306.1_FGP004ERF family protein
KN539357.1_FGP007ERF family protein
KN539396.1_FGP009ERF family protein
KN539477.1_FGP002ERF family protein
KN539477.1_FGP015ERF family protein
KN539694.1_FGP008ERF family protein
KN539729.1_FGP001ERF family protein
KN539827.1_FGP005ERF family protein
KN540061.1_FGP004ERF family protein
KN540122.1_FGP002ERF family protein
KN540200.1_FGP003ERF family protein
KN540554.1_FGP002ERF family protein
KN541120.1_FGP002ERF family protein
KN541188.1_FGP003ERF family protein
KN541538.1_FGP002ERF family protein
KN542792.1_FGP001ERF family protein
KN543108.1_FGP001ERF family protein
ERF Family Introduction

The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.

It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.

After finding the tobacco ERFs, many proteins in the ERF family were identified and implicated in many diverse functions in cellular processes, such as hormonal signal transduction, response to biotic and abiotic stresses, regulation of metabolism, and in developmental processes in various plant species.

Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444

The first class are proteins which bind to ethylene response elements (ERE) or GCC boxes (tobacco EREBPs, Arabidopsis AtEBP and AtERF1-5, and tomato Pti4-6) found in the promoters of ethylene-inducible pathogenesis related genes. The GCC box is an 11 bp sequence (TAAGAGCCGCC) with a core GCCGCC sequence that is required for binding.
The second class includes proteins that bind to the C-repeat or dehydration response element (DRE) in the promoters of genes that are turned on in response to low temperatures and/or water deficit (CBF1, CBF2, CBF3/DREB1A and DREB2A). The C-repeat/DREs contain the core sequence CCGAC.

Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102